Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C03721.1 |
Family | CE8 |
Protein Properties | Length: 347 Molecular Weight: 37885.5 Isoelectric Point: 10.1514 |
Chromosome | Chromosome/Scaffold: 3 Start: 70697284 End: 70700613 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 86 | 329 | 0 |
TVDKNPAYGDFTSIQDAIDSLPFINLVRVVIKVHAGVYTEKVSIPQLKSFITIEGAGAAKTIVQWGDRADTPGPKGQHMGTYGSATFGVNSPFFIAKNIT FKNTTPVPKPGAVGKQAVAFRISADTAAFWGCSFLGAQDTLYDHFGRHYYKDCYIEGSVDFIFGNGLSLFELSGARDSINVGALTAQGRSSMLEDTGFSF LKCKVTGSGALYLGRAWGPFSRVVFAYTWMDDIIIPKGWSNWGD |
Full Sequence |
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Protein Sequence Length: 347 Download |
MPENRHSLAS HLIVVVVVLL LSSRTSLCHT KGLRPGRSAR KPVPQNMTRV QYSEQQFMKW 60 VKFVGRLKHS IFKTAKNKLS PSYTLTVDKN PAYGDFTSIQ DAIDSLPFIN LVRVVIKVHA 120 GVYTEKVSIP QLKSFITIEG AGAAKTIVQW GDRADTPGPK GQHMGTYGSA TFGVNSPFFI 180 AKNITFKNTT PVPKPGAVGK QAVAFRISAD TAAFWGCSFL GAQDTLYDHF GRHYYKDCYI 240 EGSVDFIFGN GLSLFELSGA RDSINVGALT AQGRSSMLED TGFSFLKCKV TGSGALYLGR 300 AWGPFSRVVF AYTWMDDIII PKGWSNWGDP GREMSGSTTT IASVLK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02773 | PLN02773 | 9.0e-83 | 91 | 335 | 256 | + pectinesterase | ||
PLN02665 | PLN02665 | 3.0e-84 | 84 | 333 | 254 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 3.0e-91 | 48 | 327 | 283 | + probable pectinesterase | ||
PLN02304 | PLN02304 | 4.0e-92 | 84 | 335 | 262 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 0 | 44 | 335 | 295 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD87905.1 | 0 | 29 | 334 | 26 | 336 | pectinesterase-like [Oryza sativa Japonica Group] |
EMBL | CAN63186.1 | 0 | 14 | 335 | 10 | 332 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_197474.1 | 0 | 1 | 335 | 1 | 336 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330522.1 | 0 | 13 | 335 | 11 | 334 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514210.1 | 0 | 10 | 335 | 4 | 336 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3e-36 | 94 | 327 | 17 | 252 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 5e-30 | 94 | 327 | 13 | 248 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 8e-24 | 83 | 324 | 31 | 303 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.000000000000001 | 82 | 256 | 3 | 186 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000000001 | 82 | 256 | 3 | 186 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |