y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.D00316.1 |
Family | GH3 |
Protein Properties | Length: 731 Molecular Weight: 80593.5 Isoelectric Point: 6.1811 |
Chromosome | Chromosome/Scaffold: 4 Start: 5240898 End: 5244359 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 39 | 297 | 0 |
GVPRLGLPKYEWWSEALHGVSNVGPGTFFDDVVPGATSFPTVILTAAAFNESLWKSIGQAVSTEARAMYNLGRAGLTFWSPTINVVRDPRWGRALETPGE DPFVVGRYAVDYVRGLQDVEGADHHRTADPNQRPLKVSSCCKHYAAYDVENWLGVDRYHFDARVRQQDMEETFLRPFEMCVKEGDVSSVMCSFNRVDGIP TCADPNLLKDTIRGEWDLHGYIVADCDSIQVMVDDHKFLNDTNEDAVARTLKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 731 Download |
MSAFSFCDAS LTYEERAKDL VKRMVLHEKV RQLGNGAYGV PRLGLPKYEW WSEALHGVSN 60 VGPGTFFDDV VPGATSFPTV ILTAAAFNES LWKSIGQAVS TEARAMYNLG RAGLTFWSPT 120 INVVRDPRWG RALETPGEDP FVVGRYAVDY VRGLQDVEGA DHHRTADPNQ RPLKVSSCCK 180 HYAAYDVENW LGVDRYHFDA RVRQQDMEET FLRPFEMCVK EGDVSSVMCS FNRVDGIPTC 240 ADPNLLKDTI RGEWDLHGYI VADCDSIQVM VDDHKFLNDT NEDAVARTLK AGLDLDCGVY 300 YTNFTPGAVA AGKVREREID TSLKYLYVVL MRLGYFDGSP EFKSLGKDDI CTKANLELAA 360 RAAKEGIVLL KNNRTLPLSP HQARNIAVVG PHANATEAMI GNYAGVPCRF TAPIDGFSRY 420 GVVTYKAGCA DTACKNESFI FPAMKAAKRA DATVILAGLD LSVEAEALDR TDLVLPGYQT 480 QLINQVAEVA KGPVVLENPN IGGILWAGYP GEEGGRAIAD VVFGHYNPGG RLPLTWHKAD 540 YVDMLPMTSM PLRPVPSLGY PVRTYEFFNG SVVYPFGYGL SYTRFNYSLS PAKRFVDLKV 600 ENLDYCRDLS YSHNTKRPPC PAMSIDDLNC GHDIDFEVEV TNTGHRDGSD VVLVYSKPPH 660 GILGTHIKQL IGFKRVFIRE QSSQKVHFKI NVCKGLEIVD SAANHILPSG GHSIVIGDDV 720 VSFPFQVNFS * 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 2.0e-48 | 28 | 394 | 375 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-53 | 367 | 584 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 6.0e-55 | 26 | 320 | 299 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-77 | 19 | 719 | 780 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 2 | 727 | 750 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002274591.1 | 0 | 1 | 729 | 61 | 802 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 1 | 729 | 62 | 803 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 1 | 729 | 65 | 807 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 19 | 729 | 2 | 693 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 1 | 730 | 63 | 802 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 63 | 690 | 78 | 696 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
PDB | 3u48_A | 0 | 63 | 690 | 78 | 696 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
PDB | 3u4a_B | 0 | 63 | 690 | 78 | 696 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
PDB | 3u4a_A | 0 | 63 | 690 | 78 | 696 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
PDB | 2x41_A | 6.02558e-44 | 15 | 692 | 2 | 676 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GW867030 | 319 | 20 | 338 | 0 |
BX838810 | 308 | 2 | 309 | 0 |
GW867097 | 336 | 19 | 354 | 0 |
BX837031 | 299 | 2 | 300 | 0 |
DY932965 | 314 | 6 | 319 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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