Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.D00323.1 |
Family | GT5 |
Protein Properties | Length: 1027 Molecular Weight: 115737 Isoelectric Point: 5.1411 |
Chromosome | Chromosome/Scaffold: 4 Start: 5291159 End: 5303808 |
Description | starch synthase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 531 | 1015 | 0 |
VVHIAAEMAPVAKVGGLGDVVTGLSKALQKRGHLVEIIVPKYDCMQYDRILDLRALDAVVESYFDGRLYKNKVWVGTVDGLPVYFIEPLHPDKFFWRGQL YGEPDDFKRFSFFSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTAPASELASCGLDVQELNRPDRMQDNSAHD RINPVKGAVVFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNLHSKKFVGILNGIDTDEWNPATDAFLEVQYSSNDLQGKAENKRAIRRQLGLSSANALKPM VGCVTRLVPQKGVHLIRHALYRTLELGGQFVLLGSSPVPHIQREFDGIANQFRNHDDIRLILKYDESLSHHIFAASDMLIIPSIFEPCGLTQMIAMRYGS IPIARKTGGLNDSVFDVDDETIPFQFRNGYTFLNADEQGLNNALERAFSHYNNDPQSWQQLVHKVMNIEFGWDPSASQYEELYSK |
Full Sequence |
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Protein Sequence Length: 1027 Download |
MAAAAMSTCL LSRGLSGPCR RDSSFPRTFA SPAPRRRLLP ASCKMRQRGL RCSASSGSRR 60 PQVKKASPDR PPSIVVNGEG EEDAALAESV RTADREIVAD DSEDDDSDGV VIDVENQNAD 120 RTEASDSTAM ETNLAIISDT GQQLSGIQVE DLMGMIKNAE KNILLLNQAR VSALEDLNDT 180 LSEKKALQGE INILEMKLAE TDARIRVAAQ EKMHAEILED QLGKLRSELI QRSGTEQSEQ 240 SIFENENIHL SAEKPLSYQN STHFLNEELS SLRAENVSLK NDIEALKTEL NSLKDTDERV 300 MVLEKQRFHL ESALEDLESK LSVSQEDVSK LSSLKFEYKD LWEKVENLQL LLDKATKQAD 360 QAIVELQQNQ ELRKKVDKLE ETLEEANVYK VSSEKLQQYN ELMQQKIKLL EERLQRSDEE 420 IHSYVQLYQE SVNEFQDTLN SLKEESRKRM LDEPVDNMPR EFWSHLLLKI DGWLLEKKLS 480 ADDAKLLREM VWKRDRGICD AYMACKDKSE LEALATFLRL ISAPSSPGLY VVHIAAEMAP 540 VAKVGGLGDV VTGLSKALQK RGHLVEIIVP KYDCMQYDRI LDLRALDAVV ESYFDGRLYK 600 NKVWVGTVDG LPVYFIEPLH PDKFFWRGQL YGEPDDFKRF SFFSRAALEL LLQSGKKPDI 660 IHCHDWQTAF VAPLYWDLYA PKGLNSARIC FTCHNFEYQG TAPASELASC GLDVQELNRP 720 DRMQDNSAHD RINPVKGAVV FSNIVTTVSP TYAQEVRTAE GGKGLHSTLN LHSKKFVGIL 780 NGIDTDEWNP ATDAFLEVQY SSNDLQGKAE NKRAIRRQLG LSSANALKPM VGCVTRLVPQ 840 KGVHLIRHAL YRTLELGGQF VLLGSSPVPH IQREFDGIAN QFRNHDDIRL ILKYDESLSH 900 HIFAASDMLI IPSIFEPCGL TQMIAMRYGS IPIARKTGGL NDSVFDVDDE TIPFQFRNGY 960 TFLNADEQGL NNALERAFSH YNNDPQSWQQ LVHKVMNIEF GWDPSASQYE ELYSKSVARA 1020 RAARLN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02316 | PLN02316 | 1.0e-152 | 527 | 1013 | 495 | + synthase/transferase | ||
PLN02939 | PLN02939 | 0 | 2 | 1023 | 1024 | + transferase, transferring glycosyl groups | ||
TIGR02095 | glgA | 0 | 529 | 1016 | 491 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 531 | 1015 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
PRK00654 | glgA | 0 | 529 | 1019 | 493 | + glycogen synthase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACT09058.1 | 0 | 32 | 1026 | 30 | 1001 | starch synthase IV precursor [Solanum lycopersicum] |
RefSeq | NP_193558.3 | 0.0000000001 | 1 | 183 | 1 | 219 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | NP_193558.3 | 0 | 290 | 1023 | 303 | 1036 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002274716.1 | 0 | 3 | 1025 | 2 | 1010 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298514.1 | 0 | 133 | 1023 | 16 | 884 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3guh_A | 0 | 531 | 1015 | 3 | 475 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
PDB | 2r4u_A | 0 | 531 | 1015 | 3 | 475 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
PDB | 2r4t_A | 0 | 531 | 1015 | 3 | 475 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
PDB | 2qzs_A | 0 | 531 | 1015 | 3 | 475 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3d1j_A | 0 | 531 | 1015 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO851132 | 333 | 604 | 936 | 0 |
CF828776 | 286 | 654 | 939 | 0 |
GW865616 | 298 | 635 | 932 | 0 |
CB893818 | 281 | 528 | 808 | 0 |
EL448877 | 316 | 457 | 772 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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