| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.D00605.1 |
| Family | CBM57 |
| Protein Properties | Length: 627 Molecular Weight: 68451.7 Isoelectric Point: 6.9708 |
| Chromosome | Chromosome/Scaffold: 4 Start: 11171215 End: 11179792 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 203 | 362 | 3e-26 |
| CGNGKAKFDSDYSGDQWGGDRFWDSVTTFRLSYDQESFTKESITQASLSPNYYPEGLYQTAIIGTSQQPDLEYTMDVDPNRNYSVWLHFAEIDTLVTGVG QRVFNILMNGDTIFQDVDIIKMSGDRYAALVLNTTVAVSGRTLTIRFLPKVGDIAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 627 Download |
| MLGRRRLLLP WLLALVLAAP ASLARPAPFA LRISCGARED VHTPPTNTLW FKDFAYTGGI 60 PNNATRPSFI TPALNTLRYF PLSEGPDNCY SIDGVPIGHY SVRTFFGLVK QPNFDNEPLF 120 DVSVEGTQIS SLSSGWTNHD DQVFAEARVF IADNTASLCL HSTGHGDPAI VSIEILQVDD 180 RAYYFGPDWG RGTILRTVKR LSCGNGKAKF DSDYSGDQWG GDRFWDSVTT FRLSYDQESF 240 TKESITQASL SPNYYPEGLY QTAIIGTSQQ PDLEYTMDVD PNRNYSVWLH FAEIDTLVTG 300 VGQRVFNILM NGDTIFQDVD IIKMSGDRYA ALVLNTTVAV SGRTLTIRFL PKVGDIAIIN 360 AIEVFEIVMA ESKTSVDEVR ALQTLKDGLM LPLRFGWNGD PCVPQQHPWS GIDCRFNSTR 420 NNWVIDGLGL GNQGLRGSLL PNISGLHHLL SINLSGNSIQ GPIPSSLGTI ASLEILDFSY 480 NFLNGSIPES LGQLTSLKKL NLNGNSLSGK VPAALGGRLL HGASFNFTDN AGLCGIPGLP 540 TCGPHLSAGA KVGIAFGACV TLLLLVMCSV CWWKRRQNIL RAQQIAAREA PYAKKRTHFS 600 RDIQLARHHN HGHAHSATEN GPSLLS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.002 | 33 | 173 | 163 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 9.0e-9 | 377 | 516 | 167 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 1.0e-17 | 200 | 362 | 175 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 4.0e-63 | 33 | 367 | 355 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 33 | 626 | 596 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABH07898.1 | 0 | 31 | 626 | 1 | 599 | leucine-rich repeat family protein [Solanum lycopersicum] |
| EMBL | CBI30598.1 | 0 | 27 | 626 | 23 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002279791.1 | 0 | 31 | 626 | 1 | 600 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 31 | 626 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 13 | 626 | 12 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.000000000004 | 421 | 549 | 630 | 755 | A Chain A, Structural And Functional Analyses Of A Conserved Hydrophobic Pocket Of Flavivirus Methyltransferase |
| PDB | 3rgz_A | 0.000000007 | 428 | 515 | 399 | 486 | A Chain A, Structural And Functional Analyses Of A Conserved Hydrophobic Pocket Of Flavivirus Methyltransferase |
| PDB | 3rgz_A | 0.000004 | 428 | 515 | 373 | 462 | A Chain A, Structural And Functional Analyses Of A Conserved Hydrophobic Pocket Of Flavivirus Methyltransferase |
| PDB | 3rgz_A | 0.00002 | 435 | 515 | 478 | 558 | A Chain A, Structural And Functional Analyses Of A Conserved Hydrophobic Pocket Of Flavivirus Methyltransferase |
