Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.D00738.1 |
Family | GT47 |
Protein Properties | Length: 421 Molecular Weight: 46155.4 Isoelectric Point: 6.7406 |
Chromosome | Chromosome/Scaffold: 4 Start: 13677442 End: 13678704 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 24 | 369 | 0 |
SRAAVYVHSLPSKFNSDLLLRCRSLNIYTDMCPYVSNRGLGRPIPPVGGVGGGGSWFATHQFIAEMIFHARLENHPCRVFDPARANLFYVPFYAGLYASS MFRELSLPARDALAVDLAEHLQSLPAWRRRGGRDHFLVLGRTAWDFLRLSNQGPDFGANSLLDLPAVRNMSVLTVERQPWTGSNQHGIPYPSYFHPSTSA EMQAWRQHVTDSDRPHLFSFIGGPRKGPGKAAIREDLIRQCGESARCELVVCQPSSPAACHEPDRVLGVMAASRFCLQAPGDSFTRRSAFDAVLAGCVPV FFSPHTAYTQYRWYLPAGDPGEYSVLIDVGEGATRLGVEIEEVLAA |
Full Sequence |
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Protein Sequence Length: 421 Download |
PLAINLTLDD VAGTPPDTPA ACRSRAAVYV HSLPSKFNSD LLLRCRSLNI YTDMCPYVSN 60 RGLGRPIPPV GGVGGGGSWF ATHQFIAEMI FHARLENHPC RVFDPARANL FYVPFYAGLY 120 ASSMFRELSL PARDALAVDL AEHLQSLPAW RRRGGRDHFL VLGRTAWDFL RLSNQGPDFG 180 ANSLLDLPAV RNMSVLTVER QPWTGSNQHG IPYPSYFHPS TSAEMQAWRQ HVTDSDRPHL 240 FSFIGGPRKG PGKAAIREDL IRQCGESARC ELVVCQPSSP AACHEPDRVL GVMAASRFCL 300 QAPGDSFTRR SAFDAVLAGC VPVFFSPHTA YTQYRWYLPA GDPGEYSVLI DVGEGATRLG 360 VEIEEVLAAI PAEKAAEMRR RVIGMIPEIT YAHPNATELG FRDAVDVALD ALLEHVENQS 420 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-62 | 28 | 370 | 356 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC42883.1 | 0 | 19 | 419 | 64 | 450 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_177014.1 | 0 | 19 | 412 | 64 | 443 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270383.1 | 0 | 21 | 419 | 118 | 502 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300452.1 | 0 | 22 | 412 | 1 | 391 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336132.1 | 0 | 7 | 412 | 5 | 412 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265125 | 323 | 29 | 349 | 0 |
FC899396 | 313 | 29 | 339 | 0 |
DY298787 | 301 | 79 | 377 | 0 |
FC884199 | 275 | 79 | 351 | 0 |
DY277080 | 309 | 23 | 328 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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