Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.D00955.1 |
Family | CBM43 |
Protein Properties | Length: 483 Molecular Weight: 52087.5 Isoelectric Point: 5.6905 |
Chromosome | Chromosome/Scaffold: 4 Start: 17485250 End: 17488283 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 367 | 446 | 1.9e-25 |
WCVADPSKDLSAVMNHMKLACSVADCTTLNYGGSCNGIGAKGNISYAFNSYYQLQMQNSQSCDFDGLGMVTFLDPSVGEC | |||
GH17 | 28 | 346 | 0 |
IGVNWGTISFHRLRPSTVVDLLQQNKIQKVKLFDADPGALKALEGSGIEVMVGIPNEMLTVLGSSSVASDLWVRQNVSSFVGKGGVAIRYVAVGNEPFLS SYAGQFQNYVMPALLNLQQSLAKANLAGYVKLVVPCNADAYEADLPSQGAFRPELTQIMTQLVSFLNSNGSPFVVNIYPFLSLYGSTDFPQDYAFFGGTT HAVTDGANVYTNAFDGNFDTLVAALTKLGYGQMPIVIGEVGWPTDGALNANLTAARAFNQGLINHVLSNRGTPLRPGVPPMDVYLFSLLDEGAKSVLPGN FERHWGIFSFDGQAKYALN |
Full Sequence |
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Protein Sequence Length: 483 Download |
MLQPRTKVAT FSLLLVLSSS FPAAEPAIGV NWGTISFHRL RPSTVVDLLQ QNKIQKVKLF 60 DADPGALKAL EGSGIEVMVG IPNEMLTVLG SSSVASDLWV RQNVSSFVGK GGVAIRYVAV 120 GNEPFLSSYA GQFQNYVMPA LLNLQQSLAK ANLAGYVKLV VPCNADAYEA DLPSQGAFRP 180 ELTQIMTQLV SFLNSNGSPF VVNIYPFLSL YGSTDFPQDY AFFGGTTHAV TDGANVYTNA 240 FDGNFDTLVA ALTKLGYGQM PIVIGEVGWP TDGALNANLT AARAFNQGLI NHVLSNRGTP 300 LRPGVPPMDV YLFSLLDEGA KSVLPGNFER HWGIFSFDGQ AKYALNLGLG NRLLKDARNV 360 QYLPSRWCVA DPSKDLSAVM NHMKLACSVA DCTTLNYGGS CNGIGAKGNI SYAFNSYYQL 420 QMQNSQSCDF DGLGMVTFLD PSVGECRFLV GVTESTSAAV GTYWRGVIVW VLVMWSVWVF 480 EV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.001 | 258 | 338 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-17 | 366 | 435 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-30 | 367 | 448 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-77 | 28 | 346 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB10499.1 | 0 | 8 | 474 | 34 | 502 | glucanase like protein [Arabidopsis thaliana] |
EMBL | CAN82722.1 | 0 | 24 | 455 | 2 | 433 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002271875.1 | 0 | 25 | 460 | 36 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002329964.1 | 0 | 14 | 480 | 15 | 482 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525026.1 | 0 | 7 | 482 | 5 | 480 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 43 | 347 | 17 | 315 | A Chain A, The Structure Of Adrenal Gland Protein Ad-004 |
PDB | 3f55_C | 0 | 43 | 347 | 17 | 315 | A Chain A, The Structure Of Adrenal Gland Protein Ad-004 |
PDB | 3f55_B | 0 | 43 | 347 | 17 | 315 | A Chain A, The Structure Of Adrenal Gland Protein Ad-004 |
PDB | 3f55_A | 0 | 43 | 347 | 17 | 315 | A Chain A, The Structure Of Adrenal Gland Protein Ad-004 |
PDB | 3em5_D | 0 | 43 | 347 | 17 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |