Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.D01344.1 |
Family | AA1 |
Protein Properties | Length: 545 Molecular Weight: 61331.9 Isoelectric Point: 9.8309 |
Chromosome | Chromosome/Scaffold: 4 Start: 23954311 End: 23958559 |
Description | SKU5 similar 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 46 | 499 | 0 |
VKQKGILINGQFPGPHIDAITNDNVIISVYNYLKEPFLISWNGIQQRRNSWQDGVYGTNCPILPGRNFTYVMQVKDQIGSYFYFPSIGLQKAAGGFGSIR IWSRPLIPVPFPPPAGDFMVLAGDWFKIDHNRLRLLLDVGHNLPFPDGLLINGRGWNGYTFTVDPGKTYRFRISNVGITTSINFRIQGHKMKLVEVEGSH TLQNTYDALDIHLGQSYSVLVMADQQPQDYYVVVSSRFTPRVLTTTAVLHYSNSRQGVSGPVPAGPPNHIAWSLSQARSIRWNLTASGPRPNPQGSYHYG MIKTSRTIMLANSAPIINGKQRYAVNGASFVPADTPLKLADHFNIAGVFNLGSMPTSPNSGSGYLQTSVMSTNFREYVEIVFQNWENTVQSWHIDGYSFF VMGMDGGQWTPASRSRYNLRDTVARCTTQVFPKSWTAIYMALDNVGMWNIRSED |
Full Sequence |
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Protein Sequence Length: 545 Download |
MGDCTCRVLR SLILCLLFLL QGANGDNPYR FFTWKVTYGD IYPLGVKQKG ILINGQFPGP 60 HIDAITNDNV IISVYNYLKE PFLISWNGIQ QRRNSWQDGV YGTNCPILPG RNFTYVMQVK 120 DQIGSYFYFP SIGLQKAAGG FGSIRIWSRP LIPVPFPPPA GDFMVLAGDW FKIDHNRLRL 180 LLDVGHNLPF PDGLLINGRG WNGYTFTVDP GKTYRFRISN VGITTSINFR IQGHKMKLVE 240 VEGSHTLQNT YDALDIHLGQ SYSVLVMADQ QPQDYYVVVS SRFTPRVLTT TAVLHYSNSR 300 QGVSGPVPAG PPNHIAWSLS QARSIRWNLT ASGPRPNPQG SYHYGMIKTS RTIMLANSAP 360 IINGKQRYAV NGASFVPADT PLKLADHFNI AGVFNLGSMP TSPNSGSGYL QTSVMSTNFR 420 EYVEIVFQNW ENTVQSWHID GYSFFVMGMD GGQWTPASRS RYNLRDTVAR CTTQVFPKSW 480 TAIYMALDNV GMWNIRSEDW ARQYLGQQFY MRVYTNSNSY RDELPIPKNA LLCGRARGRR 540 TRPL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 23 | 544 | 523 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 24 | 541 | 518 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 26 | 541 | 519 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 22 | 538 | 525 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 28 | 537 | 521 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95805.1 | 0 | 1 | 544 | 1 | 544 | unknown [Populus trichocarpa] |
RefSeq | NP_193932.1 | 0 | 5 | 544 | 4 | 541 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002272880.1 | 0 | 13 | 544 | 9 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002332613.1 | 0 | 1 | 544 | 1 | 544 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518462.1 | 0 | 20 | 544 | 17 | 541 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 30 | 534 | 4 | 539 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus |
PDB | 1asq_A | 0 | 30 | 534 | 4 | 539 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus |
PDB | 1asp_B | 0 | 30 | 534 | 4 | 539 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus |
PDB | 1asp_A | 0 | 30 | 534 | 4 | 539 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus |
PDB | 1aso_B | 0 | 30 | 534 | 4 | 539 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus |