y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.E00330.1 |
Family | GH14 |
Protein Properties | Length: 544 Molecular Weight: 60614.6 Isoelectric Point: 7.6356 |
Chromosome | Chromosome/Scaffold: 5 Start: 3108619 End: 3111801 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 85 | 499 | 0 |
YIMLPLDTVTHGGNLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPMQYNWEGYAELVQMVARHGLKLQVVMSFHQCGGNVGDSCSIPLPPWALEE ISKNPDLVYTDGSGRRNPEYISLGCDSLPVLRGRTPIQVYADYMQSFRDRFSGDLGSVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMR ASLQASAEALGHMDWGKSGPHDSGQYNQFPEETGFFRREGTWNTEYGKFFLEWYSEKLLEHGDRILAAAKGVFQGTQVKLSGKVAGIHWHYRTRSHAAEL TAGYYNTRYHDGYLPIARMMGKHGVVLNFTCMEMRDGEQPEHANCSPEGLVRQVKVAAKTAGTDLAGENALERYDEGAYAQVLLTSRSDSGNSLSAFTYL RMNKRLFEENNWRNL |
Full Sequence |
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Protein Sequence Length: 544 Download |
MALTLRSSTS FINLKDNKSF KTPDEILGTV SFTQIKPSRR LRAKNSMHEI LERGISTEVT 60 RKDILEKLHA LTVSHGQQGT KVPVYIMLPL DTVTHGGNLN KPRAMNASLM ALKSAGVEGV 120 MVDAWWGLVE KDGPMQYNWE GYAELVQMVA RHGLKLQVVM SFHQCGGNVG DSCSIPLPPW 180 ALEEISKNPD LVYTDGSGRR NPEYISLGCD SLPVLRGRTP IQVYADYMQS FRDRFSGDLG 240 SVIAEIQVGM GPCGELRYPS YPESNGTWRF PGIGEFQCYD KYMRASLQAS AEALGHMDWG 300 KSGPHDSGQY NQFPEETGFF RREGTWNTEY GKFFLEWYSE KLLEHGDRIL AAAKGVFQGT 360 QVKLSGKVAG IHWHYRTRSH AAELTAGYYN TRYHDGYLPI ARMMGKHGVV LNFTCMEMRD 420 GEQPEHANCS PEGLVRQVKV AAKTAGTDLA GENALERYDE GAYAQVLLTS RSDSGNSLSA 480 FTYLRMNKRL FEENNWRNLA GFVKSMSEGG NNRLSESDLG RTDLYIGFIK EKSATKIKEA 540 ALV* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 6.0e-151 | 82 | 506 | 434 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 8.0e-178 | 85 | 502 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 543 | 548 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 77 | 511 | 441 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 82 | 506 | 433 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62440.1 | 0 | 1 | 543 | 1 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 543 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 543 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 543 | 1 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 543 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 82 | 506 | 12 | 441 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1q6c_A | 0 | 82 | 506 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 82 | 506 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 82 | 506 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 82 | 506 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103692 | 542 | 1 | 536 | 0 |
HO794833 | 412 | 120 | 530 | 0 |
HO781538 | 404 | 30 | 429 | 0 |
HO825836 | 382 | 156 | 536 | 0 |
HO593646 | 413 | 102 | 509 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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