| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.E01455.1 |
| Family | CE8 |
| Protein Properties | Length: 177 Molecular Weight: 19241.8 Isoelectric Point: 8.7766 |
| Chromosome | Chromosome/Scaffold: 5 Start: 16601258 End: 16603437 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 1 | 106 | 2.7003e-42 |
| MFVGDGIGKTIITGSRSMGGGSTTFKSATVAVIGDGFIAWDVTFRNTVGAANHQAVALRSGFDLSVFYKCNFEGYKDTFYVHSERQFYRECKIYGMVDFI FGNTTV | |||
| Full Sequence |
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| Protein Sequence Length: 177 Download |
| MFVGDGIGKT IITGSRSMGG GSTTFKSATV AVIGDGFIAW DVTFRNTVGA ANHQAVALRS 60 GFDLSVFYKC NFEGYKDTFY VHSERQFYRE CKIYGMVDFI FGNTTVMEWS GNFALKTLFY 120 AEYMNIGPGS STKNRMKWGG YQIITCASEA SKFTVGSFIA GNSWLPATSV PFTSGL* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01095 | Pectinesterase | 1.0e-24 | 66 | 162 | 108 | + Pectinesterase. | ||
| PLN02713 | PLN02713 | 3.0e-26 | 107 | 176 | 70 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 1.0e-44 | 1 | 106 | 106 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-51 | 1 | 106 | 106 | + Pectinesterase. | ||
| PLN02506 | PLN02506 | 2.0e-56 | 1 | 176 | 251 | + putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB57671.1 | 0 | 1 | 113 | 252 | 364 | pectinesterase [Citrus sinensis] |
| GenBank | AAB57671.1 | 2e-31 | 78 | 176 | 412 | 510 | pectinesterase [Citrus sinensis] |
| EMBL | CBI24282.1 | 0 | 1 | 107 | 1 | 107 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | O04887 | 0 | 1 | 116 | 252 | 368 | PME2_CITSI RecName: Full=Pectinesterase 2; Short=PE 2; AltName: Full=Pectin methylesterase; Flags: Precursor |
| Swiss-Prot | O04887 | 4e-31 | 78 | 176 | 412 | 510 | PME2_CITSI RecName: Full=Pectinesterase 2; Short=PE 2; AltName: Full=Pectin methylesterase; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 8e-39 | 1 | 107 | 60 | 166 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1gq8_A | 7e-20 | 108 | 176 | 251 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 5e-34 | 1 | 135 | 56 | 191 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1xg2_A | 4e-19 | 108 | 176 | 247 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 0.00000005 | 27 | 107 | 88 | 184 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EX335714 | 113 | 1 | 113 | 0 |
| EX335714 | 64 | 113 | 176 | 0 |
| EX336052 | 89 | 25 | 113 | 0 |
| EX336052 | 64 | 113 | 176 | 0 |
| JK706998 | 113 | 1 | 113 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Phaseolus vulgaris | Phvul.010G080000.1.146.297 | Phvul.010G080000.1.146.297 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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