Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.F01563.3 |
Family | CBM43 |
Protein Properties | Length: 353 Molecular Weight: 37636.2 Isoelectric Point: 6.1176 |
Chromosome | Chromosome/Scaffold: 6 Start: 20010826 End: 20013933 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 264 | 345 | 2.3e-33 |
WCIPKSGVSDAQLQANLDYACGQGIDCRPIQPGGACFEPNTLAAHAAYAMNLYYQNSNRSPTNCDFSQSATFSSNNPSYNGC | |||
GH17 | 7 | 221 | 0 |
NLMTQLLPAMQNMQNALNAVSLGGKIKVSSVHSMAVLKSSEPPSSGSFDPSDEMKGILGFNNATGSPFAINPYPYFAYRSDPRPETLAFCLFQPNAGRLD TKTQIKYTNMFDAQVDAVRSALNSFGYKNVEIVVAETGWPYKGDSNEVGPSIENAKAYNGNLIAHLRSLVGTPLMPGISVDTYLFALYDEDLKPGPTSER AFGLFKSDLSMNYDI |
Full Sequence |
---|
Protein Sequence Length: 353 Download |
MTSGDHNLMT QLLPAMQNMQ NALNAVSLGG KIKVSSVHSM AVLKSSEPPS SGSFDPSDEM 60 KGILGFNNAT GSPFAINPYP YFAYRSDPRP ETLAFCLFQP NAGRLDTKTQ IKYTNMFDAQ 120 VDAVRSALNS FGYKNVEIVV AETGWPYKGD SNEVGPSIEN AKAYNGNLIA HLRSLVGTPL 180 MPGISVDTYL FALYDEDLKP GPTSERAFGL FKSDLSMNYD IGLSKSSQTP AAPKMPAAPS 240 PNATVTPSPN ATVTPSPKPD KANWCIPKSG VSDAQLQANL DYACGQGIDC RPIQPGGACF 300 EPNTLAAHAA YAMNLYYQNS NRSPTNCDFS QSATFSSNNP SYNGCVYPSG KS* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-6 | 135 | 214 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-24 | 264 | 334 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-39 | 264 | 347 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-58 | 11 | 221 | 213 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN61862.1 | 0 | 1 | 348 | 143 | 477 | hypothetical protein [Vitis vinifera] |
EMBL | CBI32582.1 | 0 | 1 | 348 | 154 | 488 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 0 | 1 | 352 | 123 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 1 | 352 | 123 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002510373.1 | 0 | 1 | 352 | 124 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-40 | 253 | 350 | 1 | 99 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_D | 3e-35 | 1 | 224 | 98 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_C | 3e-35 | 1 | 224 | 98 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_B | 3e-35 | 1 | 224 | 98 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_A | 3e-35 | 1 | 224 | 98 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO782823 | 361 | 1 | 353 | 0 |
DY293193 | 331 | 18 | 348 | 0 |
HO781349 | 352 | 1 | 350 | 0 |
HO796302 | 352 | 1 | 350 | 0 |
FC916212 | 294 | 18 | 311 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|