Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.F02205.1 |
Family | CBM22 |
Protein Properties | Length: 796 Molecular Weight: 89902.7 Isoelectric Point: 8.1177 |
Chromosome | Chromosome/Scaffold: 6 Start: 29873798 End: 29877749 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM22 | 83 | 218 | 3.2e-32 |
NIILNPRFEDGLNNWAGRGCQIAVRNSIDGKIMPQSGNYFAVATGRTQSWNGIQQEITGRAQRKRAYEVDALVRIYGKNATTSTVQVTLYVQLPDLREQY ISIANVQATDKDWVQLRGKFLINNSPSKIIMYFEGP | |||
CBM22 | 253 | 394 | 9.09443e-43 |
NIIANSNLDDDTNGWFPLGNCKLSVQTGSPHVLPPMARGSLGPHEPLSGRYILVTGRTQTWMGPAQMITDKLKLYLTYQVSAWVRVGTGAFGPQIVNVAL SVDDQWVNGGQIEVSDDGWREIGGSFRLEKQPSKVMVYLQGP | |||
GH10 | 452 | 713 | 0 |
QRENSFPLGSCINRTNLDNEDFVDFFVKHFNWAVFGNELKWYWTESQQGKFNYRDADEMLDFCDKNGKQTRGHCIFWEVEGVVQPWVRALNRNDLMKAVQ NRLTGLLTRYKGRFKHYDVNNEMLHGSFYQDRLGKNIRATMFSMAHQLDPSAQLFVNDYHVEDGDDAKSSPEKYSQHVIDLQKQGAPVGGIGIQGHIDSP VGSIVCSALDKLATVGLPIWFTEMDVSSNNEYVRADDLEVMLREAFAHPAVEGVMLWGFWEL |
Full Sequence |
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Protein Sequence Length: 796 Download |
MYRKLHDFFF SNSSIISLVC KIKQRHWKKK KYFFLIKKAR RLTASDHSTY GVAAEPRRKQ 60 FRFSKDTSRI TESPQKMSSG DENIILNPRF EDGLNNWAGR GCQIAVRNSI DGKIMPQSGN 120 YFAVATGRTQ SWNGIQQEIT GRAQRKRAYE VDALVRIYGK NATTSTVQVT LYVQLPDLRE 180 QYISIANVQA TDKDWVQLRG KFLINNSPSK IIMYFEGPPA GIDILVNYCL VKHAAKPPPS 240 RPPVIKDPEF GVNIIANSNL DDDTNGWFPL GNCKLSVQTG SPHVLPPMAR GSLGPHEPLS 300 GRYILVTGRT QTWMGPAQMI TDKLKLYLTY QVSAWVRVGT GAFGPQIVNV ALSVDDQWVN 360 GGQIEVSDDG WREIGGSFRL EKQPSKVMVY LQGPSSGVDL MVGGLQIFPV DRCARFRCLD 420 VQIDLIRKRD VILKFTGSEL TGLLGAIVIV KQRENSFPLG SCINRTNLDN EDFVDFFVKH 480 FNWAVFGNEL KWYWTESQQG KFNYRDADEM LDFCDKNGKQ TRGHCIFWEV EGVVQPWVRA 540 LNRNDLMKAV QNRLTGLLTR YKGRFKHYDV NNEMLHGSFY QDRLGKNIRA TMFSMAHQLD 600 PSAQLFVNDY HVEDGDDAKS SPEKYSQHVI DLQKQGAPVG GIGIQGHIDS PVGSIVCSAL 660 DKLATVGLPI WFTEMDVSSN NEYVRADDLE VMLREAFAHP AVEGVMLWGF WELFMRENAH 720 LVDAEGEVNE AGKRLLGLKK EWLSRAHGLV EEECEFRFRG FLGTYDVEII TPCEKVCKTI 780 VVDKGYGPME VSIDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 2.0e-16 | 252 | 396 | 151 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam02018 | CBM_4_9 | 4.0e-19 | 83 | 220 | 140 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 2.0e-35 | 469 | 710 | 264 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 4.0e-82 | 454 | 736 | 304 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 3.0e-83 | 490 | 735 | 268 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002283550.1 | 0 | 78 | 795 | 262 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002283550.1 | 1e-35 | 83 | 407 | 94 | 416 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002283550.1 | 0.000000000006 | 253 | 408 | 94 | 246 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301133.1 | 0 | 80 | 795 | 332 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 82 | 402 | 1 | 309 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1i1x_A | 5e-30 | 488 | 709 | 47 | 268 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1i1w_A | 5e-30 | 488 | 709 | 47 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1k6a_A | 1e-29 | 488 | 709 | 47 | 268 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
PDB | 1gor_A | 1e-29 | 488 | 709 | 47 | 268 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
PDB | 1goq_A | 1e-29 | 488 | 709 | 47 | 268 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EB442796 | 298 | 280 | 577 | 0 |
GO850973 | 328 | 378 | 705 | 0 |
EX570690 | 295 | 503 | 796 | 0 |
EL428755 | 280 | 457 | 735 | 0 |
EB442796 | 121 | 106 | 226 | 0.000000008 |
Sequence Alignments (This image is cropped. Click for full image.) |
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