Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.F02860.2 |
Family | CBM43 |
Protein Properties | Length: 452 Molecular Weight: 48500 Isoelectric Point: 4.9741 |
Chromosome | Chromosome/Scaffold: 6 Start: 38282834 End: 38286554 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 365 | 446 | 5e-31 |
CTAKEGADPKMLQAALDWACGVGKVDCSPMLQGESCYEPDTLSAHATYAFDTYYHQMGKAPGTCDFNGVAAITTTDPSHGTC | |||
GH17 | 27 | 346 | 0 |
IGVNIGTDLSDMPHPTQVVALLKAQNIRHIRLYNTDRGILAALANTGIQVIVSVPNEQLLGIGQSNSTAANWVSQNIIVHYPATNITGISVGSEVLTALP NAAPILVNALKFIHSALVASNLDRQIKVSTPLSSSVILDSFPPSQAFFNKSLNPVLVPMLNFLQSSGSYLMLNVYPYYDYMQSNGVIPLDYALFKPLPSN KEAVDANTLLHYSNVFDATVDAAYFAMAFLNFTNIPVVVTETGWPSKGDSNEPDATVDNANTYNSNLIRHVLNKTGTPKHPGITVSTYIYELYNEDTKAG PLSEKNWGLFDASGSPIYIL |
Full Sequence |
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Protein Sequence Length: 452 Download |
MAVPPFVLLL LLVGCASTVK SDQEPFIGVN IGTDLSDMPH PTQVVALLKA QNIRHIRLYN 60 TDRGILAALA NTGIQVIVSV PNEQLLGIGQ SNSTAANWVS QNIIVHYPAT NITGISVGSE 120 VLTALPNAAP ILVNALKFIH SALVASNLDR QIKVSTPLSS SVILDSFPPS QAFFNKSLNP 180 VLVPMLNFLQ SSGSYLMLNV YPYYDYMQSN GVIPLDYALF KPLPSNKEAV DANTLLHYSN 240 VFDATVDAAY FAMAFLNFTN IPVVVTETGW PSKGDSNEPD ATVDNANTYN SNLIRHVLNK 300 TGTPKHPGIT VSTYIYELYN EDTKAGPLSE KNWGLFDASG SPIYILHLTG SGSVLANDTT 360 NQTYCTAKEG ADPKMLQAAL DWACGVGKVD CSPMLQGESC YEPDTLSAHA TYAFDTYYHQ 420 MGKAPGTCDF NGVAAITTTD PSHGTCIFSG R* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-9 | 56 | 339 | 294 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-18 | 363 | 434 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-38 | 363 | 448 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-89 | 27 | 344 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK85402.2 | 0 | 17 | 450 | 12 | 445 | beta-1,3-glucanase [Camellia sinensis] |
EMBL | CBI33479.1 | 0 | 19 | 450 | 14 | 445 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265396.1 | 0 | 19 | 450 | 14 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305879.1 | 0 | 24 | 450 | 14 | 440 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531922.1 | 0 | 23 | 450 | 30 | 457 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 27 | 344 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 27 | 349 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 27 | 349 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 27 | 349 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 27 | 349 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |