Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.F03495.1 |
Family | CBM43 |
Protein Properties | Length: 457 Molecular Weight: 48480.5 Isoelectric Point: 4.6934 |
Chromosome | Chromosome/Scaffold: 6 Start: 43693759 End: 43697040 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 368 | 450 | 2.5e-33 |
WCVANGKAGAKKLQAALDYACGKGGADCQPIQQGSACYNPNTLEAHASYAFNSYYQKNARGAGTCNFGGAAFVVTQVPEYGEC | |||
GH17 | 24 | 340 | 0 |
VGLNWGRVANDLPPPAKVVELLKSQGITLVKLYDTYDGALTALAGSGISVVVALPNEQLSSAASAQSFTDSWVQSNISKYYPSTKIVAIAVGNEVFVDPN NTTDFLVPAMNNVHASLVKYNLSDISVSSPIALSALQTSYPTSSGSFKSDLVEPVIKPMLEFLRKTGSYLMVNVYPFFAYTANSDQISLDYALLKQNPGV VDSGNGLKYNSLFDAQVDAVYAAMSALQYNDLKLVVTETGWPSKGDANEVGAGTQNAAAYNGNLVRRALTGTGTPLRPNNTVDVYLFALFNENQKTGPTS ERNYGLFYPDEQKVYSI |
Full Sequence |
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Protein Sequence Length: 457 Download |
MASPAFSCLL LLVSIFALAE SGSVGLNWGR VANDLPPPAK VVELLKSQGI TLVKLYDTYD 60 GALTALAGSG ISVVVALPNE QLSSAASAQS FTDSWVQSNI SKYYPSTKIV AIAVGNEVFV 120 DPNNTTDFLV PAMNNVHASL VKYNLSDISV SSPIALSALQ TSYPTSSGSF KSDLVEPVIK 180 PMLEFLRKTG SYLMVNVYPF FAYTANSDQI SLDYALLKQN PGVVDSGNGL KYNSLFDAQV 240 DAVYAAMSAL QYNDLKLVVT ETGWPSKGDA NEVGAGTQNA AAYNGNLVRR ALTGTGTPLR 300 PNNTVDVYLF ALFNENQKTG PTSERNYGLF YPDEQKVYSI PLTLEQLASD PNNASKAQVP 360 TAPVGQTWCV ANGKAGAKKL QAALDYACGK GGADCQPIQQ GSACYNPNTL EAHASYAFNS 420 YYQKNARGAG TCNFGGAAFV VTQVPEYGEC DFPTGY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-5 | 43 | 333 | 302 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-17 | 367 | 438 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-30 | 367 | 452 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-103 | 24 | 340 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL77689.1 | 0 | 16 | 456 | 19 | 460 | AT5g55180/MCO15_13 [Arabidopsis thaliana] |
RefSeq | NP_568822.1 | 0 | 16 | 456 | 19 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278044.1 | 0 | 1 | 456 | 1 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316783.1 | 0 | 21 | 456 | 1 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002529472.1 | 0 | 21 | 456 | 28 | 472 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 340 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 24 | 340 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 24 | 340 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 24 | 340 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 24 | 340 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |