Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.F04178.1 |
Family | CBM57 |
Protein Properties | Length: 591 Molecular Weight: 64743.2 Isoelectric Point: 6.3669 |
Chromosome | Chromosome/Scaffold: 6 Start: 50064783 End: 50068907 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 362 | 530 | 2.2e-29 |
INCGGTKMTFEGNQYVEDTSPNGPSIFSSSSFGSSEKWAYSSTGLYMGKSDASYTANNPFFMNVNGSEFYQTARLSPGSIRYYGLCMMKGSYKVRLHFAE IQYSDDETFSNLGRRIFDVSIQGNQVLKDFNIVEEAGGVGKGIYRDFDNIYVNGGTLEIHLYWSGKGTT |
Full Sequence |
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Protein Sequence Length: 591 Download |
MKMQNKYWNV AKTSCSDGIG LNVTTLPLGM TSTVTCDCSF VNGTVCHVTR IKLKGLNLTG 60 IFPDEFGNLT YLREIDFTRN YISGSLPTTL TQIPLTILSA LGNRISSIPK EIGNISMLKE 120 LILEDNLLED TLEPNIGNLS RLRKLRVSAN NFVGTIPESF GNLKNLETFC IDGSTLSGKI 180 LDFIGNWTKI TRLDIQGTSM EGPIPSSISL LKNLMELRIY DLKGPSSNFP NLKGMDMMKT 240 LILRNCLLIG SIPDYIGYWT SLKTLDLSIN RLTGQVPDTM EAALDYMFLT NNCLTGAVPS 300 WVTSSKHYLL VSYENILSSL ISCQQSEVNL VSSYSSKGNN SLWCMEKDLP CSGKAQYHSL 360 FINCGGTKMT FEGNQYVEDT SPNGPSIFSS SSFGSSEKWA YSSTGLYMGK SDASYTANNP 420 FFMNVNGSEF YQTARLSPGS IRYYGLCMMK GSYKVRLHFA EIQYSDDETF SNLGRRIFDV 480 SIQGNQVLKD FNIVEEAGGV GKGIYRDFDN IYVNGGTLEI HLYWSGKGTT AIPDRGVYGP 540 LISAIAVTPN FDVGSAGLSA GAITGIAVAS VVLLILILLF LWLTGFFGNK * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 1.0e-12 | 57 | 299 | 253 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 5.0e-14 | 57 | 300 | 254 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 1.0e-19 | 27 | 299 | 287 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 5.0e-23 | 51 | 299 | 254 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 2.0e-54 | 358 | 545 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20154.1 | 0 | 2 | 552 | 212 | 759 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283453.1 | 0 | 2 | 552 | 43 | 587 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002283477.1 | 0 | 2 | 552 | 41 | 593 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316847.1 | 0 | 2 | 553 | 53 | 606 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524510.1 | 0 | 2 | 556 | 50 | 604 | kinase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rgz_A | 0.00000000000004 | 49 | 280 | 338 | 558 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rgz_A | 0.0000000000003 | 40 | 300 | 288 | 556 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rgz_A | 0.0000006 | 58 | 299 | 430 | 721 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rgz_A | 0.00002 | 66 | 315 | 219 | 523 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rgz_A | 0.0003 | 46 | 169 | 613 | 729 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |