Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G00445.1 |
Family | CBM43 |
Protein Properties | Length: 471 Molecular Weight: 50025.7 Isoelectric Point: 5.3781 |
Chromosome | Chromosome/Scaffold: 7 Start: 7861151 End: 7866242 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 382 | 463 | 2.5e-33 |
WCVPKSGVSDAQLQASLDYACSNNIDCSPIQPGGACFDPNTIASHAAFAMNLYYQTLGRNPWNCDFSQTATLTTNNPSYNGC | |||
GH17 | 33 | 350 | 0 |
VGVNYGQVADNLPPPESTAKLLQSTTIGKVRLYGADPAIIKALANTGIGIVIGAANGDIPSLAADPNAAGQWVGANILPFYPASKITLVTVGNEVFMSND ENLMSQLLPAMQNMQRAITAAGLGGKVKVSSVHAMSLLSQSDPPSSGRFHPSFEARMRDVLQFQRENGSPLPINPYPFFAYQSDPRPETLAFCLFQPNAG RVDSGTGIKYMNMFDAQVDAVYSALKALGYKDIEIMVAETGWPYNGDSNEVGTSVENAKAYNGNLIAHLRSLVGTPLMPGKSVDTYIFALYDEDLKPGPT SERSFGMYKPDLTMTYDI |
Full Sequence |
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Protein Sequence Length: 471 Download |
MAASFLSNPS SLSFLLLLLL LHASRLAFSQ SFVGVNYGQV ADNLPPPEST AKLLQSTTIG 60 KVRLYGADPA IIKALANTGI GIVIGAANGD IPSLAADPNA AGQWVGANIL PFYPASKITL 120 VTVGNEVFMS NDENLMSQLL PAMQNMQRAI TAAGLGGKVK VSSVHAMSLL SQSDPPSSGR 180 FHPSFEARMR DVLQFQRENG SPLPINPYPF FAYQSDPRPE TLAFCLFQPN AGRVDSGTGI 240 KYMNMFDAQV DAVYSALKAL GYKDIEIMVA ETGWPYNGDS NEVGTSVENA KAYNGNLIAH 300 LRSLVGTPLM PGKSVDTYIF ALYDEDLKPG PTSERSFGMY KPDLTMTYDI GLAKSSQTPA 360 SPKAPVTPTP VTPTPKPTGP GWCVPKSGVS DAQLQASLDY ACSNNIDCSP IQPGGACFDP 420 NTIASHAAFA MNLYYQTLGR NPWNCDFSQT ATLTTNNPSY NGCVYPGGST * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-10 | 48 | 343 | 303 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-23 | 382 | 452 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-40 | 382 | 465 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-99 | 33 | 350 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 11 | 469 | 2 | 455 | unknown [Populus trichocarpa] |
GenBank | ABK95837.1 | 0 | 11 | 470 | 2 | 452 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 29 | 467 | 55 | 489 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284340.1 | 0 | 29 | 467 | 55 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 26 | 470 | 21 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 33 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 33 | 352 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 33 | 352 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 33 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 33 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |