y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G00650.1 |
Family | GH3 |
Protein Properties | Length: 790 Molecular Weight: 84307.8 Isoelectric Point: 6.8945 |
Chromosome | Chromosome/Scaffold: 7 Start: 11267132 End: 11271993 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 89 | 338 | 0 |
NVDRLGIPNYKWWSEALHGVSYVGGGTSFSSLVPGATSFPQVILTAASFNATLFETIGKVVSTEARAMHNVGLAGLTFWSPNVNIFRDPRWGRGQETRGE DPLLSSKYASGYVRGLQQSDDGNADRLKVAACCKHYTAYDIDNWKGVDRFHFNAVVTQQDLDDTFQPPFKSCVLDGNVASVMCSYNQVNGKPTCADPDLL AGIVRGKWKLNGYIVSDCDSVKVFYNTQHYTKTPEEAAAKAILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 790 Download |
MTPARNRAPK VSSVLLCLCC IHAFFSCAVQ LVAGQTPKPV FACDVGSDPS LAGFGFCNTS 60 LGVEARVADL VQRLTLQEKV GFLVNNAGNV DRLGIPNYKW WSEALHGVSY VGGGTSFSSL 120 VPGATSFPQV ILTAASFNAT LFETIGKVVS TEARAMHNVG LAGLTFWSPN VNIFRDPRWG 180 RGQETRGEDP LLSSKYASGY VRGLQQSDDG NADRLKVAAC CKHYTAYDID NWKGVDRFHF 240 NAVVTQQDLD DTFQPPFKSC VLDGNVASVM CSYNQVNGKP TCADPDLLAG IVRGKWKLNG 300 YIVSDCDSVK VFYNTQHYTK TPEEAAAKAI LAGLDLNCGS FLGQHTEAAV KGGLLNESAI 360 DKAISNNFAT LMRLGFFDGD PRKQLYGKLG PDDVCTPSNQ ELAREAARQG IVLLKNTVGS 420 LPLSSTAIKS LAVIGPNANV MKTMIGNYEG TPCKYVTPLQ GLAAVVSTTY VAGCADVGCG 480 TAQTDDAKKA AASADATVLV MGADQSIEKE SLDRVDLHLP GQQSLLVSEV ANVSKGPVIL 540 VIMSGGGMDV SFAKDNDKIT SILWVGYPGE AGGAAMADVI FGDHNPSGRL PMTWYPQSYA 600 DAVPMTNMNM RPDPATGYPG RTYRFYTGPT VYSFGDGLSY SNFSHSLVQA PQLVSVPLEE 660 GHVCRSSACK SLEATGEMCS NLALDVHLNV KNVGRFSGSH TVFLFSSPPS VHRAPQKHLL 720 GFEKVFLASQ SEAQVQFKVD VCKDLSVVDE LGHWKVALGT HVLHVGDLKH ALSVQIGPSG 780 LSLSPPRRF* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-52 | 411 | 641 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-56 | 92 | 474 | 389 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-63 | 75 | 366 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-76 | 42 | 760 | 814 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 13 | 776 | 785 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 1 | 776 | 1 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 8 | 776 | 200 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 39 | 776 | 31 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 39 | 776 | 2 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 5 | 776 | 6 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 125 | 775 | 91 | 731 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u48_A | 0 | 125 | 775 | 91 | 731 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u4a_B | 0 | 125 | 775 | 91 | 731 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u4a_A | 0 | 125 | 775 | 91 | 731 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 4i3g_B | 1e-37 | 65 | 464 | 52 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |