Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G01206.1 |
Family | GH10 |
Protein Properties | Length: 583 Molecular Weight: 64968.2 Isoelectric Point: 7.2022 |
Chromosome | Chromosome/Scaffold: 7 Start: 20149260 End: 20152913 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 232 | 491 | 0 |
TKPGFPFGCGMNFHILDSADYQNWFASRFRYTTFTNAMKWYSTEEKQGQENYTIADAMVKFSQDNGISIRGHNVFWDDPKYQPDWVKALSPEDLRKAAEK RINSVVSRYAGQLIAWDVVNENLHFSFFEDNLGKNASSIYYSTAYKLDPTPRMFLNEYNTIEYCGDEKVSPGNYKKRLKEIFSYPGNEDIPAGIGVQGHF GPGQPNLAYMRSSLEILATTGVPIWLTEVSVEPGVNQAQYLEEILREAFSHPAVEGIIMF |
Full Sequence |
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Protein Sequence Length: 583 Download |
MPLFLWLTFV LFYSGSAISG QITQAVFSDV QYDASATTQC LAQPGSTMYG GGVIVNPEFS 60 NGTAGWAMFG KGVIEESISL SKNRFMVARN RKRPMDSVSQ KVQLEKGKFY AFSAWIQVNE 120 GSETVSVVFG VGDGEFVPGG SIVAEQGCWS LLKGGVAVNS SSTVDVLFKS KNTSKEIWVD 180 NVALQPFSKK QWRFHQDKNI EKVRKSRVRF QITYAKKTGL TVRGAKFLVK QTKPGFPFGC 240 GMNFHILDSA DYQNWFASRF RYTTFTNAMK WYSTEEKQGQ ENYTIADAMV KFSQDNGISI 300 RGHNVFWDDP KYQPDWVKAL SPEDLRKAAE KRINSVVSRY AGQLIAWDVV NENLHFSFFE 360 DNLGKNASSI YYSTAYKLDP TPRMFLNEYN TIEYCGDEKV SPGNYKKRLK EIFSYPGNED 420 IPAGIGVQGH FGPGQPNLAY MRSSLEILAT TGVPIWLTEV SVEPGVNQAQ YLEEILREAF 480 SHPAVEGIIM FAGPAYAGFN ATALTDKSFN NTPAGDIVDN LIEEWKSPYF KACTNDGGFF 540 STSLFHGEYE ITITNPATNC SSTSRFEVTR DSSGRTFHFQ IG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 3.0e-33 | 267 | 481 | 227 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 5.0e-53 | 236 | 521 | 312 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 4.0e-75 | 269 | 516 | 271 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 5 | 581 | 10 | 579 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 32 | 581 | 25 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313182.1 | 0 | 37 | 573 | 2 | 536 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 40 | 581 | 8 | 548 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002532422.1 | 0 | 39 | 581 | 22 | 562 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nq6_A | 1e-24 | 238 | 518 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1i1x_A | 6e-24 | 238 | 521 | 18 | 301 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1i1w_A | 6e-24 | 238 | 521 | 18 | 301 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1tux_A | 7e-24 | 238 | 522 | 18 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 1e-23 | 238 | 521 | 18 | 301 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |