Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G01210.1 |
Family | GH10 |
Protein Properties | Length: 535 Molecular Weight: 59130.6 Isoelectric Point: 5.5298 |
Chromosome | Chromosome/Scaffold: 7 Start: 20487557 End: 20490032 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 184 | 443 | 0 |
TKPGFAFGCGMNSHILESTDYQNWFASRFKFTAFTNEMKWYSTEKKQGQENYTIADAMLKFAQDNNISIRGHTVFWDDPKYQTDWVKALSPKELQEAAER RINSIVSRYAGDVIAWDVVNENLHFSFLEDNLGKNASSIYFSKAYKLDPSARMFVNEFNTIEFGGDVKVSPGNLKKRLEGMLSYPGNEDIPAGIGVQGHF GPGQPNLAYMRSSLDILATTGAPIWLTEVSVEPGLYQAQYLEEVLREAYSHPAVEGIIIF |
Full Sequence |
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Protein Sequence Length: 535 Download |
MYGGGIIVNP QFTYGTYGWT VSGQGEIAER VSRTNNGFMA AYNRKLPLDS FSQKVLLEKG 60 KFYMFSAWVQ VSEGSETVSA VFGTGGGEFV PGGSVVAEHG CWSLLKGGIA ANSSGPVDLL 120 FESKNTSKEI WVDNVSLQPF SKKQWRFHQD QSIEKVRKGK VRLQVTYPYS KAGVGGATIL 180 IKQTKPGFAF GCGMNSHILE STDYQNWFAS RFKFTAFTNE MKWYSTEKKQ GQENYTIADA 240 MLKFAQDNNI SIRGHTVFWD DPKYQTDWVK ALSPKELQEA AERRINSIVS RYAGDVIAWD 300 VVNENLHFSF LEDNLGKNAS SIYFSKAYKL DPSARMFVNE FNTIEFGGDV KVSPGNLKKR 360 LEGMLSYPGN EDIPAGIGVQ GHFGPGQPNL AYMRSSLDIL ATTGAPIWLT EVSVEPGLYQ 420 AQYLEEVLRE AYSHPAVEGI IIFAGPLPAG FSATALTDMN FNSTPAGDVV DKLIKEWKSD 480 DLKARTDEGG FFGTSLLHGE YEITIIDPIT NSSSTSIFEV TKDSSEKIFH IQME* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 0.005 | 4 | 80 | 82 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 2.0e-31 | 170 | 445 | 300 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 4.0e-46 | 188 | 470 | 311 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 3.0e-69 | 221 | 470 | 272 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 2 | 534 | 49 | 580 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 2 | 533 | 43 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313182.1 | 0 | 3 | 531 | 15 | 540 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 2 | 533 | 17 | 548 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002532422.1 | 0 | 2 | 533 | 32 | 562 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1tux_A | 6e-23 | 190 | 474 | 18 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1x_A | 1e-21 | 190 | 476 | 18 | 303 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1w_A | 1e-21 | 190 | 476 | 18 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1xas_A | 2e-21 | 177 | 415 | 3 | 240 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
PDB | 2bnj_A | 3e-21 | 190 | 476 | 18 | 303 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV141191 | 248 | 181 | 428 | 0 |
HS044964 | 218 | 296 | 513 | 0 |
DV140884 | 220 | 209 | 428 | 0 |
ES830806 | 283 | 69 | 349 | 0 |
ES830806 | 49 | 356 | 404 | 0.97 |
Sequence Alignments (This image is cropped. Click for full image.) |
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