| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.G01213.1 |
| Family | GH10 |
| Protein Properties | Length: 583 Molecular Weight: 65031.3 Isoelectric Point: 6.5243 |
| Chromosome | Chromosome/Scaffold: 7 Start: 20530488 End: 20534193 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 232 | 491 | 0 |
| TKPGFPFGCGMNFHILDSADYQNWFASRFRYTTFTNAMKWYSTEEKQGQENYTIADAMVKFSQDNGISIRGHNVFWDDPKYQPDWVKTLSPEDLRKAAEK RINSVVSRYAGQLIAWDVVNENLHFSFFEDNLGKNASSIYYSTAYKLDPTPRMFLNEYNTIEYCGDEKVSPGNYKKRLKEIFSYPGNEDIPVGIGVQGHF GPGQPNLAYMRSSLEILAATGVPIWLTEVSVEPGVNQAQYLEEILREAFSHPAVEGIIMF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 583 Download |
| MPLFLWLTFV LFYSGSAISG QITQAVFSDV QYDALATTQC LAEPGSTMYG GGVIVNPEFS 60 NGTAGWAMFG KGVIEECISR SKNRFMVARN RKRPMDSVSQ KVRLEKGKFY AFSAWIQVNE 120 GSETVSVVFG VGDGEFVPGG SIVAEQGCWS LLKGGVAANS SSTVNVLFES KNTSKEIWVD 180 NVALQPFSKK QWRFHPDKSI EKVRKSRVRF QITYVKKRGL AVRGAKFLVK QTKPGFPFGC 240 GMNFHILDSA DYQNWFASRF RYTTFTNAMK WYSTEEKQGQ ENYTIADAMV KFSQDNGISI 300 RGHNVFWDDP KYQPDWVKTL SPEDLRKAAE KRINSVVSRY AGQLIAWDVV NENLHFSFFE 360 DNLGKNASSI YYSTAYKLDP TPRMFLNEYN TIEYCGDEKV SPGNYKKRLK EIFSYPGNED 420 IPVGIGVQGH FGPGQPNLAY MRSSLEILAA TGVPIWLTEV SVEPGVNQAQ YLEEILREAF 480 SHPAVEGIIM FAGPAYAGFN ATALTDKSFN NTPAGDIVDN LIEEWKSPDF EACTNDGGFF 540 STSLFHGEYE ITITDPATNC SSTSRFEVTR DSSGRTFHFQ IG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 0.005 | 51 | 127 | 82 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 3.0e-33 | 267 | 481 | 227 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-54 | 236 | 521 | 312 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 8.0e-76 | 269 | 516 | 271 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU19437.1 | 0 | 5 | 581 | 10 | 579 | unknown [Glycine max] |
| RefSeq | XP_002313181.1 | 0 | 32 | 581 | 25 | 573 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313182.1 | 0 | 37 | 573 | 2 | 536 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532419.1 | 0 | 35 | 581 | 3 | 548 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002532422.1 | 0 | 39 | 581 | 22 | 562 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 4e-25 | 238 | 518 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1xas_A | 1e-24 | 233 | 463 | 11 | 240 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
| PDB | 1e0v_A | 1e-24 | 233 | 463 | 11 | 240 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0n_A | 2e-24 | 233 | 463 | 11 | 240 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0m_A | 2e-24 | 233 | 463 | 11 | 240 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
