| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.G01215.1 |
| Family | GH10 |
| Protein Properties | Length: 497 Molecular Weight: 55970.7 Isoelectric Point: 5.3764 |
| Chromosome | Chromosome/Scaffold: 7 Start: 20560800 End: 20563234 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 147 | 406 | 0 |
| TKPGFPFGCGMNFHILESADYQNWFASRFRYTTFTNAMKWYSTEAKQGQENYTIADAMLKFAQDNNISIRGHNVFWDNQKYQPDWVKTLAPDDLRKAAEK RINSVVSRYAGELIAWDVVNENLHFSFFEDNLGENASSMYYSMAYKLDPTPRMFLNEYNTIEYSGEEKASPGNYKKRLQEIFSYPGNEDIPAGIGVQGHF GTGQPNLAYMRSSLDILATTGVPIWLTEVFVDPGANQAQNLEEVLREAYSHPGVEGIIMF | |||
| Full Sequence |
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| Protein Sequence Length: 497 Download |
| MVARDRKCPS DSFSQKVQLE KGMFYAFSAW VQVSRGSETV WVAFRTGDGE FVRGGSVVAE 60 QGCWSLLKGG IAANSSSPAD VLFESKNIST ELWVDNVALQ PFLKKQWRNH QEESIEKVRK 120 STVRFQITSV NERGLGVGGA NVLIKQTKPG FPFGCGMNFH ILESADYQNW FASRFRYTTF 180 TNAMKWYSTE AKQGQENYTI ADAMLKFAQD NNISIRGHNV FWDNQKYQPD WVKTLAPDDL 240 RKAAEKRINS VVSRYAGELI AWDVVNENLH FSFFEDNLGE NASSMYYSMA YKLDPTPRMF 300 LNEYNTIEYS GEEKASPGNY KKRLQEIFSY PGNEDIPAGI GVQGHFGTGQ PNLAYMRSSL 360 DILATTGVPI WLTEVFVDPG ANQAQNLEEV LREAYSHPGV EGIIMFAGPV YAGYNSMALA 420 DKNFNNTLAG DVVDKLIQEW RSKDLEARAD EEGFLSTTLL HGEYEISITD PISNSSSTSR 480 FEVTRDSFRK IYHFHI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 1.0e-34 | 182 | 396 | 225 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-52 | 151 | 403 | 271 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 7.0e-76 | 184 | 433 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU19437.1 | 0 | 1 | 486 | 86 | 569 | unknown [Glycine max] |
| RefSeq | XP_002313181.1 | 0 | 1 | 496 | 80 | 573 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313182.1 | 0 | 1 | 485 | 51 | 533 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313183.1 | 0 | 1 | 496 | 13 | 506 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532419.1 | 0 | 1 | 496 | 54 | 548 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 3e-24 | 153 | 406 | 15 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2cnc_A | 1e-23 | 124 | 378 | 5 | 275 | A Chain A, Family 10 Xylanase |
| PDB | 1ta3_B | 1e-23 | 153 | 382 | 17 | 246 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 1i1x_A | 2e-22 | 153 | 377 | 18 | 240 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 1i1w_A | 2e-22 | 153 | 377 | 18 | 240 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DV141191 | 248 | 144 | 391 | 0 |
| HS044964 | 218 | 259 | 476 | 0 |
| ES830806 | 294 | 31 | 322 | 0 |
| DV140884 | 220 | 172 | 391 | 0 |
| ES830806 | 92 | 319 | 408 | 0.17 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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