Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G01217.1 |
Family | GH10 |
Protein Properties | Length: 559 Molecular Weight: 62486.8 Isoelectric Point: 5.0057 |
Chromosome | Chromosome/Scaffold: 7 Start: 20578656 End: 20581872 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 211 | 468 | 0 |
PGFPFGCGMNFHILESADYQNWFASRFRYATFTNAMKWYSTEKEQGQEDYSVADAMLKFVQDNNISIRGHNVFWDDPKYQPDWVRSLSPDDLRKAAEKRI NSVVSRYAGELIAWDVVNENLHFSFFEDNLGENASSMYYSMAYKLDPTPRMFLNEYNTIEYSGDEKVSPGNYKKRFQEIFSYPGNEDIPAGIGVQGHFGA GQPNLAYMRSGLDILATTGVPIWLTEVSVAPGANQAQYLEEVLREAYSHPGVEGIIMF |
Full Sequence |
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Protein Sequence Length: 559 Download |
MQTVFDDYYD SSATTQCLAE PGSLMYGGGV ILNPEFIHGT SGWTVLGEGA TEVRISHTNN 60 RFMVARDRKR PTDSFSQKVQ LEKGMFYAFS AWVQASQGSE TVAVVFRTRD GKFVRGGSVV 120 AKQGCWSLLK GGIAANSSSP ADVLFESKNT LTEIWVDNVA LQPFSKKQWR NRQEESIEKV 180 RKSTVRFQIT SANERGLGVG GANVLIKQIK PGFPFGCGMN FHILESADYQ NWFASRFRYA 240 TFTNAMKWYS TEKEQGQEDY SVADAMLKFV QDNNISIRGH NVFWDDPKYQ PDWVRSLSPD 300 DLRKAAEKRI NSVVSRYAGE LIAWDVVNEN LHFSFFEDNL GENASSMYYS MAYKLDPTPR 360 MFLNEYNTIE YSGDEKVSPG NYKKRFQEIF SYPGNEDIPA GIGVQGHFGA GQPNLAYMRS 420 GLDILATTGV PIWLTEVSVA PGANQAQYLE EVLREAYSHP GVEGIIMFAG PAYAGFNSTA 480 LADMNFDNTP AGDVVDQLIQ EWRSEDLVAH ADDGGFFSTT LLHGEYEITI TDPISNFSST 540 SRFEVTKDSF KIIYHFHI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 9.0e-32 | 244 | 458 | 227 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 2.0e-50 | 205 | 495 | 316 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 3.0e-72 | 246 | 495 | 273 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 9 | 548 | 32 | 569 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 9 | 558 | 25 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313182.1 | 0 | 14 | 552 | 2 | 538 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 17 | 558 | 8 | 548 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002532422.1 | 0 | 16 | 558 | 22 | 562 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1i1x_A | 5e-25 | 215 | 501 | 18 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1w_A | 5e-25 | 215 | 501 | 18 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 1e-24 | 215 | 501 | 18 | 303 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1tux_A | 3e-24 | 215 | 499 | 18 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1gor_A | 4e-24 | 215 | 501 | 18 | 303 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV141191 | 248 | 206 | 453 | 0 |
HS044964 | 218 | 321 | 538 | 0 |
ES830806 | 294 | 93 | 384 | 0 |
AJ627746 | 179 | 373 | 551 | 0 |
ES830806 | 92 | 381 | 470 | 0.82 |
Sequence Alignments (This image is cropped. Click for full image.) |
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