Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G02070.1 |
Family | CE8 |
Protein Properties | Length: 398 Molecular Weight: 44413 Isoelectric Point: 8.4089 |
Chromosome | Chromosome/Scaffold: 7 Start: 38023158 End: 38032419 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 87 | 377 | 0 |
MTVAQDGTGDFRTVQEAVDAVPLGNACRTVVRVAPGVYRQPVYVPKTKNFITLAGLRPEDTVLTWHNTAAKIDHHQASRLIGTGTFGCGSTIVEGEDFIA ENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLRDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQELTGYIFLR CVITGNGGTSYTHLGRPWGPFGRVVYAYTYMDACIKQVGWNNWGKTENERTACFYEYRCFGPGSCPSKRVTWARELVDEEAEQFLMHNFID |
Full Sequence |
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Protein Sequence Length: 398 Download |
MQSKFFKKGE EEENNIQSSR KGKREGETEK PKQKVAGRQQ QDSFPPSITG QSPPSRFLDR 60 SPVTSVPHSR PRSHRSGTTS AMAARVMTVA QDGTGDFRTV QEAVDAVPLG NACRTVVRVA 120 PGVYRQPVYV PKTKNFITLA GLRPEDTVLT WHNTAAKIDH HQASRLIGTG TFGCGSTIVE 180 GEDFIAENIT FENSAPEGSG QAVAIRVTAD RCAFYNCRFL GWQDTLYLHY GKQYLRDCYI 240 EGSVDFIFGN STALLEHCHI HCKSAGFITA QSRKSSQELT GYIFLRCVIT GNGGTSYTHL 300 GRPWGPFGRV VYAYTYMDAC IKQVGWNNWG KTENERTACF YEYRCFGPGS CPSKRVTWAR 360 ELVDEEAEQF LMHNFIDPNP ENPWLAQRMA VRIPYSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 3.0e-89 | 88 | 379 | 306 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 3.0e-93 | 83 | 385 | 311 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-98 | 77 | 377 | 303 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 4.0e-106 | 84 | 377 | 302 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 82 | 397 | 316 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 82 | 397 | 1 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 85 | 397 | 5 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 82 | 397 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 82 | 397 | 1 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 82 | 397 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 87 | 396 | 9 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 5.04467e-44 | 88 | 358 | 6 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-24 | 97 | 370 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-24 | 97 | 370 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-24 | 97 | 370 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR994392 | 306 | 82 | 387 | 0 |
DY292729 | 314 | 82 | 394 | 0 |
DY292725 | 299 | 82 | 380 | 0 |
ES794113 | 291 | 81 | 371 | 0 |
ES794113 | 33 | 366 | 398 | 0.002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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