Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G02118.1 |
Family | CBM43 |
Protein Properties | Length: 500 Molecular Weight: 53458.9 Isoelectric Point: 5.8959 |
Chromosome | Chromosome/Scaffold: 7 Start: 38609589 End: 38614128 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 443 | 3.2e-31 |
CVGKDGADKKMLQAALDWACGPGKVDCSLLLQGQACYEPDNVVAHATYAFNAYYQKMGKALGTCDFKGVATVTTTNPSHGSC | |||
GH17 | 24 | 343 | 0 |
IGVNIGTDLSNMPSPTQVVALLKAQNIRHVRLYDTDHAMLLALANSGIRVTVSVPNDQLLGIGQSNATAAYWVARNIVAHVPATNITVIAVGSEVLTTLQ NAAPVLVSAMKFIHSALVASNLDSRIKVSTPHSSSIIIDSFPPSQAFFNRTWDPVMVPLLKFLQSTGSYLMLNVYPYYDYMQSNGAIPLDYALFRPLPPN KEAVDSNTLLHYNNVFDAVVDAAYFAMSYLNFTNVPIVVTESGWPSKGDSSEADATLENANTYNSNLIKHVLNNTGTPKHPGVAVSTYIYELYNEDQRPG SVSEKNWGLFDANGVPIYIL |
Full Sequence |
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Protein Sequence Length: 500 Download |
MALLLLFLLL FPVSLASADE GPFIGVNIGT DLSNMPSPTQ VVALLKAQNI RHVRLYDTDH 60 AMLLALANSG IRVTVSVPND QLLGIGQSNA TAAYWVARNI VAHVPATNIT VIAVGSEVLT 120 TLQNAAPVLV SAMKFIHSAL VASNLDSRIK VSTPHSSSII IDSFPPSQAF FNRTWDPVMV 180 PLLKFLQSTG SYLMLNVYPY YDYMQSNGAI PLDYALFRPL PPNKEAVDSN TLLHYNNVFD 240 AVVDAAYFAM SYLNFTNVPI VVTESGWPSK GDSSEADATL ENANTYNSNL IKHVLNNTGT 300 PKHPGVAVST YIYELYNEDQ RPGSVSEKNW GLFDANGVPI YILHLTGAGT VLANDTTNQT 360 FCVGKDGADK KMLQAALDWA CGPGKVDCSL LLQGQACYEP DNVVAHATYA FNAYYQKMGK 420 ALGTCDFKGV ATVTTTNPSH GSCIFPGSGG RNGTSVNGTI LAPSSNSTTS GCPPQYFFDV 480 GSITSSLIIT ILHLALVLL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-7 | 256 | 336 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-19 | 360 | 432 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-40 | 360 | 445 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-77 | 24 | 341 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26850.1 | 0 | 18 | 478 | 17 | 477 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002312452.1 | 0 | 23 | 499 | 3 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314794.1 | 0 | 23 | 499 | 17 | 493 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527772.1 | 0 | 2 | 483 | 3 | 482 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002531922.1 | 0 | 20 | 499 | 30 | 508 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 24 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 24 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 24 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 24 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |