| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.G02346.3 |
| Family | CBM57 |
| Protein Properties | Length: 529 Molecular Weight: 57622 Isoelectric Point: 4.6588 |
| Chromosome | Chromosome/Scaffold: 7 Start: 41816250 End: 41825171 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 215 | 361 | 8.5e-21 |
| DVDYFGRSWQSDYSARTAATRKIIDAISTASSIAGTNRQPNYFPMKLYQTAVTVGQMGALEYELEVDAKLDYLLWFHFAEIDPGVNKAGQRVFDVLVNGA NATRIDIYKEVGRFAAFDWHYTVKNLSTTVLNVKLVPVVGAPLLSGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 529 Download |
| MFSLFFLLLL PLLSASAPVP HPYGNVSYHI DCGGNSPVVD SFNTTWLPDR YFTGGAAAVV 60 SEPLRFRQPQ EKTLRYFPLS SGKKNCYVLP GLPSGRYYLR TFTVYDNYDG KSHPPSFDAS 120 VEGTLVFSWR SPWPSPDLAG GSGAYSDLFA FVRDGEADVC FYSIATDPPV IGSLSLVQVD 180 PLSYDSASVG TNFILVNYGR LDCGDGQWGP GFSDDVDYFG RSWQSDYSAR TAATRKIIDA 240 ISTASSIAGT NRQPNYFPMK LYQTAVTVGQ MGALEYELEV DAKLDYLLWF HFAEIDPGVN 300 KAGQRVFDVL VNGANATRID IYKEVGRFAA FDWHYTVKNL STTVLNVKLV PVVGAPLLSG 360 IENYALVPAD LATDPQQVIA MRSLKESLRV PDRMGWNGDP CAPTNWDAWE GVTCHTNKDK 420 TALVIYQIDL GSQGLKGFIS DQVGLLSNLI SLNLSSNSLG GNLPSGLGQK SLVRLDLSNN 480 QFVGSIPDSL TVSNLQLVLL NGNQLEGRVP EEVYSIGVHG GEIEYVNL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 2.0e-7 | 26 | 162 | 152 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam11721 | Malectin | 6.0e-10 | 200 | 361 | 176 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 5.0e-57 | 30 | 364 | 355 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 2.0e-94 | 20 | 527 | 518 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG50525.1 | 0 | 13 | 524 | 20 | 500 | AC084221_7 hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_564237.2 | 0 | 13 | 524 | 20 | 523 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
| RefSeq | XP_002281668.1 | 0 | 17 | 524 | 21 | 522 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
| RefSeq | XP_002457393.1 | 0 | 11 | 524 | 20 | 525 | hypothetical protein SORBIDRAFT_03g006620 [Sorghum bicolor] |
| RefSeq | XP_002524408.1 | 0 | 2 | 524 | 1 | 517 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hq1_A | 0.00000009 | 380 | 513 | 31 | 156 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 4hq1_A | 0.006 | 430 | 518 | 216 | 304 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3rj0_A | 0.0001 | 428 | 490 | 492 | 555 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3rj0_A | 0.0003 | 399 | 511 | 608 | 719 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
