Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G02674.1 |
Family | CBM43 |
Protein Properties | Length: 316 Molecular Weight: 33187.2 Isoelectric Point: 7.9312 |
Chromosome | Chromosome/Scaffold: 7 Start: 44929436 End: 44931446 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 229 | 310 | 7.8e-33 |
WCVAKPSVPEPIIQEAMNYACGSGAECASIEPNGSCFQPNTLFAHASYAFNSYWQRTKVAGGSCSFGGTAVLVTVDPSYDGC |
Full Sequence |
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Protein Sequence Length: 316 Download |
MERSRACLKL WILLHLLSLC IFFIHSDARR VTARSKGTAH PKNPALRSTK RIRVTRKLDL 60 PSNDQPYVSS PLTLPPYDSL PPMPLPDLSP PFCIYPPSTP QPPASTTNPP PTGITPSPYV 120 YISPILPAQN PPPSPDVVIP GPPESFLSPP GPVVVPVPPA PGTGPSPTPP EISPPYNVPS 180 IPISFPSPPS SVPSPGGGGI VPSPFLPPIV YPPPTVPPSP NSGSSIALWC VAKPSVPEPI 240 IQEAMNYACG SGAECASIEP NGSCFQPNTL FAHASYAFNS YWQRTKVAGG SCSFGGTAVL 300 VTVDPSYDGC HFAYL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-22 | 228 | 299 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-39 | 228 | 312 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34142.1 | 0.001 | 12 | 97 | 5 | 91 | unnamed protein product [Vitis vinifera] |
EMBL | CBI34142.1 | 0 | 227 | 314 | 165 | 252 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264966.1 | 0 | 1 | 315 | 1 | 368 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312230.1 | 0 | 62 | 306 | 4 | 292 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516415.1 | 0 | 61 | 314 | 3 | 262 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-19 | 229 | 312 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |