Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H00217.1 |
Family | GH47 |
Protein Properties | Length: 662 Molecular Weight: 74986.7 Isoelectric Point: 4.8635 |
Chromosome | Chromosome/Scaffold: 8 Start: 2428861 End: 2439159 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 46 | 471 | 0 |
MFYHAFDGYMEHAFPKDELRPLSCQGEDTIGNYALTLIDSLDMLALLGDRERFTSSVEWIGKNLRFDINKTVSVFETTIRILGGLLSAHLIASDYATGMR IPSYEDQLLHLAEDLARRLLPAFDTPTGIPFGSVNLMHGVDEQESKITSTAGGGTLTLEFGVLSRLANNPIYEEVTKNAVRGLWARRSKLNLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYLLFGEDEYLYIFQEAYGAAMHYLHNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAIRTHAAFFSV WKRYGFTPEGFNLATLNVQQGQKSYPLRPELMESTYWLFKATRDPRYLDAGRDMVASLQYGARCPCGYCHISDVEFHKQEDHMESFFLAETVKYLWLLFD LAAGPDNLVENGPYKYVFSTEGHLLP |
Full Sequence |
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Protein Sequence Length: 662 Download |
MRSLMRLFSL YLFIVSAIHG SFVHRALADG VTPEEAKQLR DEVREMFYHA FDGYMEHAFP 60 KDELRPLSCQ GEDTIGNYAL TLIDSLDMLA LLGDRERFTS SVEWIGKNLR FDINKTVSVF 120 ETTIRILGGL LSAHLIASDY ATGMRIPSYE DQLLHLAEDL ARRLLPAFDT PTGIPFGSVN 180 LMHGVDEQES KITSTAGGGT LTLEFGVLSR LANNPIYEEV TKNAVRGLWA RRSKLNLVGA 240 HINVFTGEWT QKDAGIGTSI DSFYEYLLKA YLLFGEDEYL YIFQEAYGAA MHYLHNDPWY 300 VEVNMDSAAI VWPLFNSLQA FWPGLQVLAG DIDPAIRTHA AFFSVWKRYG FTPEGFNLAT 360 LNVQQGQKSY PLRPELMEST YWLFKATRDP RYLDAGRDMV ASLQYGARCP CGYCHISDVE 420 FHKQEDHMES FFLAETVKYL WLLFDLAAGP DNLVENGPYK YVFSTEGHLL PATPQISLVR 480 EHCSYLGAYC RSGDSRQKSY TSDTSFSEQK NYTKEYGGRI HTYLPSDTSY TSAPFSGFIK 540 GVCPGLTHGQ KFGISYLNPT YTHDDNSDYK DRDRGEHSVE ERHSIVIDAD QDDGKEQSDN 600 SEYKEDIRES VDSGSQNVKD PAFQVMVFND DDGNRLTDDS NYNQHDRESG DKRLESHFPQ 660 R* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PTZ00470 | PTZ00470 | 1.0e-72 | 34 | 475 | 484 | + glycoside hydrolase family 47 protein; Provisional |
pfam01532 | Glyco_hydro_47 | 5.0e-166 | 46 | 471 | 461 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26354.1 | 0 | 29 | 560 | 28 | 593 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199184.1 | 0 | 10 | 591 | 9 | 574 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002280131.1 | 0 | 29 | 592 | 28 | 590 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311656.1 | 0 | 28 | 591 | 1 | 562 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517026.1 | 0 | 1 | 611 | 5 | 605 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4ayr_A | 0 | 27 | 444 | 1 | 413 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 4ayq_A | 0 | 27 | 444 | 1 | 413 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 4ayp_A | 0 | 27 | 444 | 1 | 413 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 4ayo_A | 0 | 27 | 444 | 1 | 413 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1nxc_A | 0 | 37 | 471 | 18 | 464 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |