Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H00492.1 |
Family | GT47 |
Protein Properties | Length: 472 Molecular Weight: 54076.2 Isoelectric Point: 7.6334 |
Chromosome | Chromosome/Scaffold: 8 Start: 6400249 End: 6401946 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 53 | 394 | 0 |
CSGRYIYVHDLPSRFNDEILKNCTSLIKWFDMCPSMVNEGLGPRIDDSRGVLSHGNWFATNQFLLEVVFRNRMRQYECLTNDSSLASAVFVPFYAGLDVG RHLWNFSTSVRDSLAQDLTNWLADRPEWNRMWGRDHFLVGGRIAWDFRRQSNDVSDWGNNLMFLPESKNMTMLSIESSSWNNDIAIPYPTYFHPSSEAQV LEWQNKVRTHERRYLFSFAGAPRPSLEDSIRSDLINQCKASNGTCALLNCGYVVNKCDDPVEVMNVFESSDFCLQPPGDSFTRRSTFDSILAGCIPVFFH PGSAYVQYIWHLPENSSKYSVFIPEDKVKRGHINIKQVLSRI |
Full Sequence |
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Protein Sequence Length: 472 Download |
MEKSVRRSCY KPCQVTSLVT LLCFAFLCLD YLTFHGKGDR DMTHPNKESA DPCSGRYIYV 60 HDLPSRFNDE ILKNCTSLIK WFDMCPSMVN EGLGPRIDDS RGVLSHGNWF ATNQFLLEVV 120 FRNRMRQYEC LTNDSSLASA VFVPFYAGLD VGRHLWNFST SVRDSLAQDL TNWLADRPEW 180 NRMWGRDHFL VGGRIAWDFR RQSNDVSDWG NNLMFLPESK NMTMLSIESS SWNNDIAIPY 240 PTYFHPSSEA QVLEWQNKVR THERRYLFSF AGAPRPSLED SIRSDLINQC KASNGTCALL 300 NCGYVVNKCD DPVEVMNVFE SSDFCLQPPG DSFTRRSTFD SILAGCIPVF FHPGSAYVQY 360 IWHLPENSSK YSVFIPEDKV KRGHINIKQV LSRISRDAVL SMREEVVQLI PRIVYADPRS 420 RDHKFQDSFD TAVKGVLKRI ESIRRRVSDG KDPSSGFSDQ NSTKFNMPRT A* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-65 | 52 | 394 | 357 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002280815.1 | 0 | 35 | 470 | 79 | 510 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321098.1 | 0 | 47 | 467 | 44 | 465 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518606.1 | 0 | 47 | 461 | 70 | 481 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002518609.1 | 0 | 47 | 461 | 70 | 484 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 1 | 465 | 1 | 519 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |