Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H00909.2 |
Family | CE8 |
Protein Properties | Length: 341 Molecular Weight: 37435.4 Isoelectric Point: 9.4161 |
Chromosome | Chromosome/Scaffold: 8 Start: 11293232 End: 11296321 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 90 | 334 | 0 |
TVSQDGTGDYRTVSEALNSIPAFNTRRVILVVKPGIYREKINVPRQMSFVTFLGDSTSPPTITGNDTASVTGRGGTPLKTFQSATVAVDADYFVAINVKF ENTAPHEVGSLGEQAVALRISGTKAAFYNCSFIGNQDTLYDHKGLHYFNNCFIQGSVDFIFGYGRSLYEFAQNCHLNSVTKKVASLTAQKRTNASLASGF SFKNSTITGSGLLYLGRAWGDYSRVIFSYTFMDRVVAPQGWSDWG |
Full Sequence |
---|
Protein Sequence Length: 341 Download |
MHTACTMSSS LSPTQMLLLL LSLCICKISL ASSSSSEDDA FRRWVSWNVE NYRRETSSNA 60 MLTAQAPGIP GKKVVDWKLW KAEMSKIRKT VSQDGTGDYR TVSEALNSIP AFNTRRVILV 120 VKPGIYREKI NVPRQMSFVT FLGDSTSPPT ITGNDTASVT GRGGTPLKTF QSATVAVDAD 180 YFVAINVKFE NTAPHEVGSL GEQAVALRIS GTKAAFYNCS FIGNQDTLYD HKGLHYFNNC 240 FIQGSVDFIF GYGRSLYEFA QNCHLNSVTK KVASLTAQKR TNASLASGFS FKNSTITGSG 300 LLYLGRAWGD YSRVIFSYTF MDRVVAPQGW SDWGDPKRDA * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 5.0e-80 | 84 | 338 | 255 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 4.0e-80 | 90 | 333 | 245 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 3.0e-82 | 91 | 338 | 250 | + pectinesterase | ||
PLN02665 | PLN02665 | 5.0e-97 | 44 | 340 | 302 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 5.0e-110 | 95 | 339 | 246 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79461.1 | 0 | 41 | 340 | 36 | 332 | hypothetical protein [Vitis vinifera] |
GenBank | EEC69509.1 | 0 | 40 | 333 | 69 | 354 | hypothetical protein OsI_38743 [Oryza sativa Indica Group] |
RefSeq | NP_001067039.1 | 0 | 40 | 333 | 68 | 353 | Os12g0563700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002320279.1 | 0 | 97 | 340 | 1 | 241 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002443368.1 | 0 | 28 | 333 | 66 | 371 | hypothetical protein SORBIDRAFT_08g018360 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2.99878e-43 | 91 | 333 | 11 | 252 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-35 | 91 | 333 | 7 | 248 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.00000000000001 | 91 | 304 | 35 | 248 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000000002 | 99 | 265 | 18 | 190 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000000002 | 99 | 265 | 18 | 190 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |