y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H01372.1 |
Family | GT1 |
Protein Properties | Length: 442 Molecular Weight: 48882.6 Isoelectric Point: 7.2694 |
Chromosome | Chromosome/Scaffold: 8 Start: 16425220 End: 16429454 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 2 | 406 | 0 |
LIVGTRGDIQPFVAIGKRLQEHGHRVRLATHSNFREFVLTAGLEFYPLGGDPKVLAWYMVKNKGILPSGPSEIQIQRNELKDIILSLLPACMDPDPNSNM PFEADAIIANPPACGHIHVAEALKIPLHIFFTMPWTPTGEFPHPLSRVKQPAGYRLSYQIIDALIWIAIRDMINEFRKKKLKLRPVTYLCGSNSPPPDVP IGYMWSPQLVPKPKDWGPKIDVVGFCFLDLASSYEPPDSLVKWLEEGEKPIYIGFGSLPVQEPQRMTDIIIKSLEATGQRGIVSKGWGGLGNLAEPEYVY LLDNCPHDWLFARCSAVVHHGGAGTTAAGLRAACPTTIIPFFGDQTFWGEQVYARGVGPAPIPVDDFSLEKLIAAIRFMLDPKVKERAMDLATAMENEDG VGRAV |
Full Sequence |
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Protein Sequence Length: 442 Download |
MLIVGTRGDI QPFVAIGKRL QEHGHRVRLA THSNFREFVL TAGLEFYPLG GDPKVLAWYM 60 VKNKGILPSG PSEIQIQRNE LKDIILSLLP ACMDPDPNSN MPFEADAIIA NPPACGHIHV 120 AEALKIPLHI FFTMPWTPTG EFPHPLSRVK QPAGYRLSYQ IIDALIWIAI RDMINEFRKK 180 KLKLRPVTYL CGSNSPPPDV PIGYMWSPQL VPKPKDWGPK IDVVGFCFLD LASSYEPPDS 240 LVKWLEEGEK PIYIGFGSLP VQEPQRMTDI IIKSLEATGQ RGIVSKGWGG LGNLAEPEYV 300 YLLDNCPHDW LFARCSAVVH HGGAGTTAAG LRAACPTTII PFFGDQTFWG EQVYARGVGP 360 APIPVDDFSL EKLIAAIRFM LDPKVKERAM DLATAMENED GVGRAVNSFY KHFPRRNTGS 420 ECESLPGTSS FLSIRRCFGC S* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1819 | COG1819 | 1.0e-30 | 5 | 420 | 428 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
pfam03033 | Glyco_transf_28 | 3.0e-31 | 1 | 143 | 143 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
cd03784 | GT1_Gtf_like | 2.0e-119 | 1 | 412 | 416 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Gene Ontology | |
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GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030259 | lipid glycosylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI37267.1 | 0 | 1 | 441 | 176 | 615 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265023.1 | 0 | 1 | 441 | 223 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321244.1 | 0 | 1 | 440 | 110 | 552 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512608.1 | 0 | 1 | 440 | 155 | 595 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
RefSeq | XP_002521125.1 | 0 | 1 | 441 | 185 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3h4t_A | 7e-31 | 5 | 418 | 9 | 386 | A Chain A, Crystal Structure Of The Phnh Protein From Escherichia Coli |
PDB | 3h4i_A | 7e-31 | 5 | 418 | 9 | 386 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1rrv_B | 3e-21 | 3 | 393 | 7 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1rrv_A | 3e-21 | 3 | 393 | 7 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1iir_A | 4e-20 | 241 | 417 | 230 | 402 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GT046352 | 335 | 6 | 339 | 0 |
GO883166 | 292 | 1 | 292 | 0 |
CX664063 | 295 | 96 | 389 | 0 |
HO626576 | 419 | 1 | 414 | 0 |
GT046352 | 32 | 332 | 363 | 0.069 |
Sequence Alignments (This image is cropped. Click for full image.) |
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