y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H01381.1 |
Family | GT47 |
Protein Properties | Length: 391 Molecular Weight: 45261.2 Isoelectric Point: 9.8329 |
Chromosome | Chromosome/Scaffold: 8 Start: 16486212 End: 16488191 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 59 | 341 | 0 |
KRFKIWNYREGELPMVHIGPVNNIYSIEGHFIDELESGLSPFLARHPDQAHAFFLPISIAGIITFLYRPLVSYDRDPLIHTFTDYVDVVARKYPFWNRSL GADHFMVSCHDWAPDVTREDPDKFKNFMRVLCNANTSEGFNPTRDASLPEFNLHPFKITIPHLGLRPSRRDIFAFFSGGPHGDIRKILLHHWKDKDSEVQ VHEYLPKGQNYMQTMGRSKFCLCPSGYEVASPRLVEAIHSGCVPVILSAYYPLPFSDVLDWSKFSITVPVEKIPELKAILKRV |
Full Sequence |
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Protein Sequence Length: 391 Download |
KKISSLRRVE RDLARARAAI RDAVRARNYT SDKEETFIPR GAIYRNAYAF HQSHIEMVKR 60 FKIWNYREGE LPMVHIGPVN NIYSIEGHFI DELESGLSPF LARHPDQAHA FFLPISIAGI 120 ITFLYRPLVS YDRDPLIHTF TDYVDVVARK YPFWNRSLGA DHFMVSCHDW APDVTREDPD 180 KFKNFMRVLC NANTSEGFNP TRDASLPEFN LHPFKITIPH LGLRPSRRDI FAFFSGGPHG 240 DIRKILLHHW KDKDSEVQVH EYLPKGQNYM QTMGRSKFCL CPSGYEVASP RLVEAIHSGC 300 VPVILSAYYP LPFSDVLDWS KFSITVPVEK IPELKAILKR VSERRYLKLQ RRVVQVRQHF 360 EVNRPAKPFD VLHMVLHSVW LRRLNVGLAG * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-59 | 57 | 341 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25537.1 | 0 | 4 | 388 | 86 | 475 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197526.4 | 0 | 9 | 388 | 27 | 407 | catalytic [Arabidopsis thaliana] |
Swiss-Prot | Q3E9A4 | 0 | 9 | 388 | 85 | 465 | GLYT5_ARATH RecName: Full=Probable glycosyltransferase At5g20260 |
RefSeq | XP_002263848.1 | 0 | 4 | 388 | 5 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002531945.1 | 0 | 1 | 388 | 71 | 450 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EC939466 | 291 | 4 | 289 | 0 |
FD507587 | 228 | 100 | 327 | 0 |
GO373511 | 262 | 129 | 390 | 0 |
FE523338 | 300 | 32 | 330 | 0 |
CO983212 | 232 | 159 | 389 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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