| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.H02646.1 |
| Family | CBM43 |
| Protein Properties | Length: 441 Molecular Weight: 49198.1 Isoelectric Point: 9.0219 |
| Chromosome | Chromosome/Scaffold: 8 Start: 37200970 End: 37202493 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| CBM43 | 352 | 434 | 1.2e-22 |
| WCVARIDANVTDLGSALSSACRVNGMCDILMPGRECHEPASTFRHASYAFSAYWARFRSRGATCYFDGLAEQTVGDPSRGSCK | |||
| GH17 | 2 | 325 | 0 |
| GINYGRVGNNLPSPSQSVERIQLMRARRVKLYDADPEILKLLSRTQVQVSIMVQNQEIPGVASSQALADKWVRNNVLPYYPRTMIRFILVGNEVLSYNST DRDRQLWGDLVPAMRRIKSSLRSNRIRNIKVGTPMAMDVVESTFPPSSGRFRSDVAESVIMPLVRFLNSTRSYFFLDVYPYFPWSRNPGDISLDFALFRG NFNYTDPATGLTYTNLLDQMLDSLIFAMERLGYSNVPLLIAETGWPNSGDIDEPGANINNAATYNRNLIKKMMAEPPAGTPARPGVVIPTFIFSLYDENQ KAGPGTERHWGLLHANGDAVYEID | |||
| Full Sequence |
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| Protein Sequence Length: 441 Download |
| MGINYGRVGN NLPSPSQSVE RIQLMRARRV KLYDADPEIL KLLSRTQVQV SIMVQNQEIP 60 GVASSQALAD KWVRNNVLPY YPRTMIRFIL VGNEVLSYNS TDRDRQLWGD LVPAMRRIKS 120 SLRSNRIRNI KVGTPMAMDV VESTFPPSSG RFRSDVAESV IMPLVRFLNS TRSYFFLDVY 180 PYFPWSRNPG DISLDFALFR GNFNYTDPAT GLTYTNLLDQ MLDSLIFAME RLGYSNVPLL 240 IAETGWPNSG DIDEPGANIN NAATYNRNLI KKMMAEPPAG TPARPGVVIP TFIFSLYDEN 300 QKAGPGTERH WGLLHANGDA VYEIDLTEKR PASTYGPLPL PTNNRPYKGK LWCVARIDAN 360 VTDLGSALSS ACRVNGMCDI LMPGRECHEP ASTFRHASYA FSAYWARFRS RGATCYFDGL 420 AEQTVGDPSR GSCKFPSVTL * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-5 | 235 | 317 | 86 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-11 | 351 | 421 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-25 | 351 | 435 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-113 | 2 | 325 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64490.1 | 0 | 1 | 440 | 37 | 476 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| GenBank | ABK28569.1 | 0 | 1 | 440 | 37 | 476 | unknown [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 1 | 440 | 29 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189019.1 | 0 | 1 | 440 | 37 | 476 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002298669.1 | 0 | 1 | 440 | 23 | 462 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 1 | 326 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 1 | 326 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 1 | 326 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 1 | 327 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 1 | 327 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DR944118 | 277 | 83 | 358 | 0 |
| EX291357 | 340 | 76 | 412 | 0 |
| EX051579 | 288 | 155 | 441 | 0 |
| EX050956 | 294 | 148 | 440 | 0 |
| DT572251 | 311 | 86 | 394 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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