Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H02667.1 |
Family | GT47 |
Protein Properties | Length: 396 Molecular Weight: 45029.5 Isoelectric Point: 8.2363 |
Chromosome | Chromosome/Scaffold: 8 Start: 37632468 End: 37634075 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 25 | 309 | 0 |
SCFRTNQFLLEVIFHNKMKQYKCLTNDSSLASAIYVPYYAGLDISQYLWSSNILVRDATAFDLVGWLSGRPEWRLMSGRDHFLVAGRIAWDCRRQADDPS YWGSKLMFLPQSQNMTMLSVESSVWNNDFAIPYPTYFHPSKGAEVAQWQDRMRKQERKYLFAFAGALRPEFEFTIPGEIINQCLASYGKCKLLNCSSSTN NCDDPVNVMKVFRSSVFCLQPRGDSYTRQSTFDSILAGCIPVFFHSGTAYVQYVWHLPRDHTKYSVFIPLDEAKKVSIEPILQSI |
Full Sequence |
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Protein Sequence Length: 396 Download |
MCPYIENIGM GPAVADSRGV LLNNSCFRTN QFLLEVIFHN KMKQYKCLTN DSSLASAIYV 60 PYYAGLDISQ YLWSSNILVR DATAFDLVGW LSGRPEWRLM SGRDHFLVAG RIAWDCRRQA 120 DDPSYWGSKL MFLPQSQNMT MLSVESSVWN NDFAIPYPTY FHPSKGAEVA QWQDRMRKQE 180 RKYLFAFAGA LRPEFEFTIP GEIINQCLAS YGKCKLLNCS SSTNNCDDPV NVMKVFRSSV 240 FCLQPRGDSY TRQSTFDSIL AGCIPVFFHS GTAYVQYVWH LPRDHTKYSV FIPLDEAKKV 300 SIEPILQSIP ENEVLAMREE VIRLIPRMVY ADPRSKERNF DDAFDVAIKG VLERIGKVRK 360 VIVSGGDPSI GFAEQNHQKF NFPSSAFAKK GVYYT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-63 | 18 | 309 | 308 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_193135.2 | 0 | 1 | 382 | 128 | 511 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002300146.1 | 0 | 1 | 382 | 141 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321098.1 | 0 | 1 | 395 | 81 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518606.1 | 0 | 1 | 376 | 107 | 481 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 1 | 382 | 135 | 521 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES802449 | 291 | 96 | 384 | 0 |
JK793974 | 237 | 45 | 281 | 0 |
DV145943 | 263 | 20 | 279 | 0 |
EY661612 | 257 | 104 | 358 | 0 |
EL456596 | 269 | 17 | 284 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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