y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H02786.1 |
Family | CE8 |
Protein Properties | Length: 350 Molecular Weight: 39156.5 Isoelectric Point: 9.9417 |
Chromosome | Chromosome/Scaffold: 8 Start: 40036808 End: 40041125 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 58 | 339 | 0 |
RLSNFTTIQSAINSVPSNNINWVCIYIKKGIYREKVRIPKDKPYIILKGQAKRTTQVVWDDHGTTIGHSPTFTSLADNIVAKSISFRNLYNNPMNKKNPR VPAVAARISGDKNMFYRCGFYGLQDTLWDDQGRHYFKRCTVQGAVDFIFGSGQSIYENCAISVLGRALGPGVSGFITAQGRSNPHDTNGFVFKECNVFGS GSALLGRPWRAYARVVFYRSNFTDVVHPRGWEAGNFAGRESRLTFSEYGCYGPGSDTSRRVGWEKKLNPAVVDQLISTSFID |
Full Sequence |
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Protein Sequence Length: 350 Download |
MASSRLIKLL LLYNLCSWIL LLYFPKSTEG LTDDSDWLRR VGANAVPYRT IFVDSSRRLS 60 NFTTIQSAIN SVPSNNINWV CIYIKKGIYR EKVRIPKDKP YIILKGQAKR TTQVVWDDHG 120 TTIGHSPTFT SLADNIVAKS ISFRNLYNNP MNKKNPRVPA VAARISGDKN MFYRCGFYGL 180 QDTLWDDQGR HYFKRCTVQG AVDFIFGSGQ SIYENCAISV LGRALGPGVS GFITAQGRSN 240 PHDTNGFVFK ECNVFGSGSA LLGRPWRAYA RVVFYRSNFT DVVHPRGWEA GNFAGRESRL 300 TFSEYGCYGP GSDTSRRVGW EKKLNPAVVD QLISTSFIDS EGWLGGQPF* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 5.0e-85 | 61 | 344 | 290 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 4.0e-87 | 51 | 344 | 294 | + putative pectinesterase | ||
PLN02480 | PLN02480 | 7.0e-88 | 1 | 344 | 348 | + Probable pectinesterase | ||
PLN02176 | PLN02176 | 4.0e-108 | 49 | 348 | 301 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 2.0e-175 | 1 | 348 | 351 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 48 | 348 | 42 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189055.1 | 0 | 49 | 348 | 32 | 332 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 39 | 348 | 20 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323773.1 | 0 | 51 | 348 | 1 | 288 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 47 | 349 | 44 | 336 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3.99931e-42 | 61 | 349 | 18 | 313 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-34 | 61 | 344 | 14 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-23 | 45 | 316 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-23 | 45 | 316 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-23 | 45 | 316 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |