y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H03295.1 |
Family | CE8 |
Protein Properties | Length: 300 Molecular Weight: 33265.6 Isoelectric Point: 8.6979 |
Chromosome | Chromosome/Scaffold: 8 Start: 48391981 End: 48393433 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 2 | 285 | 0 |
IVVDQSGHGQFTKVQQAIDSVPTMNSVWTRILVKSGIYKEKVIVPSDKPCIVLEGSSASKTIIEWGDAIEVVKSATFTVYAENFKAKDIMFKNTYNENTR PGDKYPIKQAPAFQVTSDKVSFYRCRFISVQDTLSDLQGRHYFRSCYIQGAIDFIWGYGQSVYQGCLINATTGILGRAGYITAQGRDRATDSGGYVFNRC IVVGTGPVYLGRAYGPYSRVVFYKTSLSNVVMPQGWSSWHYPGQESKITYVETGCTGPGADMSGRVKWEKTLSNEELQSLADAN |
Full Sequence |
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Protein Sequence Length: 300 Download |
TIVVDQSGHG QFTKVQQAID SVPTMNSVWT RILVKSGIYK EKVIVPSDKP CIVLEGSSAS 60 KTIIEWGDAI EVVKSATFTV YAENFKAKDI MFKNTYNENT RPGDKYPIKQ APAFQVTSDK 120 VSFYRCRFIS VQDTLSDLQG RHYFRSCYIQ GAIDFIWGYG QSVYQGCLIN ATTGILGRAG 180 YITAQGRDRA TDSGGYVFNR CIVVGTGPVY LGRAYGPYSR VVFYKTSLSN VVMPQGWSSW 240 HYPGQESKIT YVETGCTGPG ADMSGRVKWE KTLSNEELQS LADANSFVNQ DGWLQKQPF* 300 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 4.0e-86 | 1 | 294 | 300 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 6.0e-92 | 2 | 295 | 294 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-92 | 1 | 295 | 306 | + pectinesterase family protein | ||
PLN02176 | PLN02176 | 1.0e-98 | 1 | 298 | 301 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 1.0e-120 | 1 | 298 | 300 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 1 | 298 | 44 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189055.1 | 0 | 2 | 298 | 34 | 332 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 1 | 298 | 31 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002512520.1 | 0 | 2 | 285 | 33 | 318 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 1 | 298 | 39 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.00053e-42 | 2 | 299 | 9 | 313 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-33 | 3 | 269 | 6 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-17 | 11 | 281 | 43 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.000000000003 | 2 | 237 | 7 | 279 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000003 | 2 | 237 | 7 | 279 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV984237 | 293 | 12 | 296 | 0 |
FC372426 | 290 | 11 | 296 | 0 |
FC350245 | 270 | 11 | 276 | 0 |
EH701256 | 265 | 17 | 271 | 0 |
EX315894 | 279 | 26 | 296 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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