Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H03297.1 |
Family | CE8 |
Protein Properties | Length: 332 Molecular Weight: 36704.8 Isoelectric Point: 4.5706 |
Chromosome | Chromosome/Scaffold: 8 Start: 48406530 End: 48408080 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 33 | 318 | 0 |
IIVDQSGEGQFTTVQEAIDSVPAKNSIWTHILVKPGIYKEKVVIPANKPCIVLEGNSASDTMIEWGDGGEVDESATFTLSAENFKAKNIGFKNTYNENTQ RGDRSSFKPASAFQITSDKVSFYQCRFIGVQDTLTDFQGRHYFDSCYIEGAIDFIWGNGQSVYQGCKINATTDILDGLPGYITAQGRNSATGDTGYIFKE CSVEGTGTVYLGRAYKQYSRVVFYKSDLSSVVVPKGWNSWRYAGEEGSITFVENKCTGAGADRSERIKWEKTLSSEELDKLTDTNT |
Full Sequence |
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Protein Sequence Length: 332 Download |
YSFLSTLLLA LLSLSKVSFS QDCSDQTQDS ETIIVDQSGE GQFTTVQEAI DSVPAKNSIW 60 THILVKPGIY KEKVVIPANK PCIVLEGNSA SDTMIEWGDG GEVDESATFT LSAENFKAKN 120 IGFKNTYNEN TQRGDRSSFK PASAFQITSD KVSFYQCRFI GVQDTLTDFQ GRHYFDSCYI 180 EGAIDFIWGN GQSVYQGCKI NATTDILDGL PGYITAQGRN SATGDTGYIF KECSVEGTGT 240 VYLGRAYKQY SRVVFYKSDL SSVVVPKGWN SWRYAGEEGS ITFVENKCTG AGADRSERIK 300 WEKTLSSEEL DKLTDTNTFI NQDGWLQKQP F* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 5.0e-88 | 32 | 326 | 296 | + Probable pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-88 | 30 | 327 | 315 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-94 | 33 | 327 | 295 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 8.0e-95 | 27 | 330 | 306 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 2.0e-120 | 30 | 330 | 302 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 4 | 330 | 16 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263748.1 | 0 | 8 | 330 | 8 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002455508.1 | 0 | 23 | 330 | 31 | 337 | hypothetical protein SORBIDRAFT_03g012410 [Sorghum bicolor] |
RefSeq | XP_002512520.1 | 0 | 8 | 315 | 9 | 316 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 23 | 330 | 29 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.99993e-41 | 33 | 331 | 9 | 313 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 7e-31 | 34 | 301 | 6 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-17 | 33 | 220 | 7 | 213 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-17 | 33 | 220 | 7 | 213 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-17 | 33 | 220 | 7 | 213 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |