y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H04048.1 |
Family | CE8 |
Protein Properties | Length: 354 Molecular Weight: 38871.8 Isoelectric Point: 7.6905 |
Chromosome | Chromosome/Scaffold: 8 Start: 58336141 End: 58338011 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 60 | 345 | 0 |
KVDINGNGDFKSVQAAVDSVPSGNSKWVIIHVRKGVYREKVHIPEDKPYIFMRGNGKGRSIITWAQSSADNVESATFKVEAPNFIAFGISFKNDAPTGVA YTSQNQSVAAFVAADKAAFYHCAFYSTHNTLFDYKGRHYYDNCYIQGSIDFIFGRGQSVFHSCEIFVIDDKRVAIHGSITAQNRESADENSGFVFVKGKV YGISDVYLGRAKGPYSRVVFAKTYLSKTIVPHGWTNWSYDGSTENLHHAEYHCHGPGAESSKRAPWSRQLTEEEAEPFMSIDFIDG |
Full Sequence |
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Protein Sequence Length: 354 Download |
MLPCSPSMRA IHFALLAALV VSVSVGLLPP ATAAAHGSSP ATVIDSPLLT QKINTDRAIK 60 VDINGNGDFK SVQAAVDSVP SGNSKWVIIH VRKGVYREKV HIPEDKPYIF MRGNGKGRSI 120 ITWAQSSADN VESATFKVEA PNFIAFGISF KNDAPTGVAY TSQNQSVAAF VAADKAAFYH 180 CAFYSTHNTL FDYKGRHYYD NCYIQGSIDF IFGRGQSVFH SCEIFVIDDK RVAIHGSITA 240 QNRESADENS GFVFVKGKVY GISDVYLGRA KGPYSRVVFA KTYLSKTIVP HGWTNWSYDG 300 STENLHHAEY HCHGPGAESS KRAPWSRQLT EEEAEPFMSI DFIDGKEWLP AWL* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02497 | PLN02497 | 4.0e-85 | 57 | 349 | 296 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-85 | 57 | 349 | 296 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 4.0e-89 | 59 | 349 | 291 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-97 | 52 | 350 | 310 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 0 | 42 | 353 | 312 | + Probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU23222.1 | 0 | 16 | 353 | 12 | 346 | unknown [Glycine max] |
RefSeq | NP_188331.1 | 0 | 42 | 353 | 29 | 340 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002272939.1 | 0 | 5 | 353 | 3 | 348 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311381.1 | 0 | 7 | 352 | 2 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523016.1 | 0 | 35 | 353 | 33 | 350 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 59 | 351 | 9 | 310 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-38 | 64 | 349 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-17 | 69 | 350 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-17 | 69 | 350 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-17 | 69 | 350 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |