Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H04823.1 |
Family | CBM43 |
Protein Properties | Length: 142 Molecular Weight: 14900.8 Isoelectric Point: 4.9495 |
Chromosome | Chromosome/Scaffold: 8 Start: 68668115 End: 68669053 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 16 | 98 | 7.9e-35 |
WCVALAGVPQADLQNALDWACGLGMADCNPIREGGRCFEPDTLVSHASYAFNNYYQQNGNSDIACNFGGTATLTRSDPSYGKC |
Full Sequence |
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Protein Sequence Length: 142 Download |
MSPPEGNTTF LGGTTWCVAL AGVPQADLQN ALDWACGLGM ADCNPIREGG RCFEPDTLVS 60 HASYAFNNYY QQNGNSDIAC NFGGTATLTR SDPSYGKCAY SASSMASSAP PRPENGPGLS 120 RYKLAGIVLV FFLSRPCSLM L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-22 | 15 | 87 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-40 | 15 | 98 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ85566.1 | 0 | 1 | 129 | 42 | 172 | unknown [Medicago truncatula] |
GenBank | ACU17215.1 | 0 | 1 | 110 | 39 | 149 | unknown [Glycine max] |
EMBL | CBI30973.1 | 0 | 1 | 127 | 587 | 714 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002332015.1 | 0 | 1 | 105 | 18 | 122 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526606.1 | 0 | 1 | 95 | 19 | 113 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-21 | 15 | 104 | 12 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CN549653 | 141 | 1 | 133 | 0 |
CV273745 | 98 | 1 | 98 | 0 |
DT019806 | 98 | 1 | 98 | 0 |
DT039619 | 98 | 1 | 98 | 0 |
DT019261 | 98 | 1 | 98 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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