Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I00108.1 |
Family | GH35 |
Protein Properties | Length: 844 Molecular Weight: 93895.9 Isoelectric Point: 7.2184 |
Chromosome | Chromosome/Scaffold: 9 Start: 2126459 End: 2134615 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 27 | 330 | 0 |
LIIDGQRKLFISASIHYPRSVPGMWPGLVKTAKEGGANMIESYVFWNGHEPSQGNYYFEDRYDLVKFVKIVQDAGMYMFLRIGPFVAAEWSYGGVPIWLH YVPGTVFRTDNAPFKYHMKKFLTYIVNLMKKEKLFASQGGPIILAQVENEYGYNEAYYGKGAKPYIMWAAKMAVSQNIGVPWVMCKQPDAPEFIIDTCND FYCDQYAPNSPKKPKIWTENWPGWFKTFGARDPHRPSEDVAFSVARFFQKGGCVHNYYMYHGGTNFGRTNGGPFITTSYDYEAPIDEYGLPRFPKWGHLK ELHK |
Full Sequence |
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Protein Sequence Length: 844 Download |
MPIVAVVLLS LLAPCFAANV TYDHRSLIID GQRKLFISAS IHYPRSVPGM WPGLVKTAKE 60 GGANMIESYV FWNGHEPSQG NYYFEDRYDL VKFVKIVQDA GMYMFLRIGP FVAAEWSYGG 120 VPIWLHYVPG TVFRTDNAPF KYHMKKFLTY IVNLMKKEKL FASQGGPIIL AQVENEYGYN 180 EAYYGKGAKP YIMWAAKMAV SQNIGVPWVM CKQPDAPEFI IDTCNDFYCD QYAPNSPKKP 240 KIWTENWPGW FKTFGARDPH RPSEDVAFSV ARFFQKGGCV HNYYMYHGGT NFGRTNGGPF 300 ITTSYDYEAP IDEYGLPRFP KWGHLKELHK SIMLCERALL NSEPTTLSLG PKAEADVYAS 360 SEFCVAFLAN TDDKEDKTVQ FRNMSYNLPA WSVSILPDCK NEVFNSAKVR SPSSVVDMVP 420 ESLIPSASSS DKDPKALEWE IFTEKPGLWG KEDFSLNSFV DHINTTKYTT DYLWYTTSIN 480 VAENEDFLKG GSQPYLLVES KGHGLHAFVN QMLQGSGYGN GTNVPFNFSA PISLKAGKND 540 IAILSLTVGI QNAGSHYEWV PAGLTTVKIK GLNKGILDIS GYKWTYKIGL EGEQLGAPYG 600 QKSVNWVSTT EPPKNQPLTW YKAIVDPPTG NEPVGLDMIH MGKGLAWLNG QPIGIYWPRL 660 VSFENPCVKG CDYRGTFKPD KCVTGCGEPS QRWYHVPRSW FKPSGNILVI LEEVGGDPTK 720 VAFSKRKMST VCSSVAEDYP SIDLESWKPD LNGDRSQDKA PRAHLKCPDS THISAVNFAS 780 FGNPVGSCGS YSLGDCHDPL SKSVVEKACL NKNECAIELT EGNFSKNLCP GSTRKLAVEA 840 VCR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 9.0e-16 | 20 | 335 | 371 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 5.0e-16 | 765 | 842 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-142 | 26 | 332 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 18 | 842 | 829 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF70823.1 | 0 | 3 | 842 | 21 | 869 | AF154422_1 beta-galactosidase [Solanum lycopersicum] |
DDBJ | BAD91080.1 | 0 | 19 | 842 | 28 | 850 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CBI21600.1 | 0 | 16 | 842 | 19 | 846 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002310540.1 | 0 | 1 | 842 | 1 | 826 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522927.1 | 0 | 15 | 842 | 24 | 802 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-39 | 26 | 315 | 14 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4e-35 | 20 | 315 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4e-35 | 20 | 315 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 4e-35 | 20 | 315 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_A | 4e-35 | 20 | 315 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |