Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I00311.1 |
Family | CBM43 |
Protein Properties | Length: 449 Molecular Weight: 49420.1 Isoelectric Point: 5.8926 |
Chromosome | Chromosome/Scaffold: 9 Start: 6001272 End: 6002730 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 446 | 5.4e-22 |
WCVFNGNNTDKDAVVNELSYACANADCSILGYGASCNNLDANGNVSYAFNMYFQVRDQDVESCTFNGFAEIVTRNFSKGSC | |||
GH17 | 25 | 344 | 0 |
IGVNWGAMMSHPLSPSIVVGMLKDNHINKVKLFDADSWTVSALAGTNMEVIVGIPNDQLKKLADSYDHAKDWVKENVTKHLYDGGVDIRYVAVGNEPFLK SYNGSNTKTTLPALENIQKALDAAGLGDKIKATVPNNADVYESPSNKPSDAVFRKDIRGIMIDMVKFLRDNKAPFMVNIYPFLSLYLNSDFPFDFAFCDG NAKSIHDKGTEYTNVFDANYDTLVWALKKAGAPDLKIIVGEVGWPTDGGKNADAKLAQRFYDGFMKKMAANKGTPLRPGHLDVYLFGLLDEDTKSIEPGM FERHWGIFRYDGQPKFPVDF |
Full Sequence |
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Protein Sequence Length: 449 Download |
MARQTEFLVG ACCVFVALSS VAHGIGVNWG AMMSHPLSPS IVVGMLKDNH INKVKLFDAD 60 SWTVSALAGT NMEVIVGIPN DQLKKLADSY DHAKDWVKEN VTKHLYDGGV DIRYVAVGNE 120 PFLKSYNGSN TKTTLPALEN IQKALDAAGL GDKIKATVPN NADVYESPSN KPSDAVFRKD 180 IRGIMIDMVK FLRDNKAPFM VNIYPFLSLY LNSDFPFDFA FCDGNAKSIH DKGTEYTNVF 240 DANYDTLVWA LKKAGAPDLK IIVGEVGWPT DGGKNADAKL AQRFYDGFMK KMAANKGTPL 300 RPGHLDVYLF GLLDEDTKSI EPGMFERHWG IFRYDGQPKF PVDFTGKGND KMPVAAKGVQ 360 YLPSQWCVFN GNNTDKDAVV NELSYACANA DCSILGYGAS CNNLDANGNV SYAFNMYFQV 420 RDQDVESCTF NGFAEIVTRN FSKGSCLFP |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.004 | 261 | 335 | 75 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-11 | 365 | 434 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-24 | 365 | 448 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-78 | 25 | 344 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62816.1 | 0 | 1 | 449 | 1 | 451 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_201284.1 | 0 | 1 | 449 | 1 | 452 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002275701.1 | 0 | 1 | 449 | 1 | 451 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310612.1 | 0 | 1 | 449 | 1 | 455 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530257.1 | 0 | 1 | 449 | 1 | 452 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 25 | 344 | 3 | 314 | A Chain A, The First X-Ray Structure Of A Sulfide:quinone Oxidoreductase: Insights Into Sulfide Oxidation Mechanism |
PDB | 3ur8_A | 0 | 25 | 344 | 3 | 314 | A Chain A, The First X-Ray Structure Of A Sulfide:quinone Oxidoreductase: Insights Into Sulfide Oxidation Mechanism |
PDB | 3ur7_B | 0 | 25 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 25 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 25 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |