Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I01059.1 |
Family | GH10 |
Protein Properties | Length: 553 Molecular Weight: 61343.1 Isoelectric Point: 8.3038 |
Chromosome | Chromosome/Scaffold: 9 Start: 21580845 End: 21583196 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 203 | 464 | 0 |
QNKLSFPFGSAINKNILTNTAYQNWFTSRFTVTVFENEMKWDTTEPSQGQEDYSAADALLKFAQQHGIPVRGHTVLWEHPGHQPSWVPSLSASQLSKAVT NRINSIMYRYKGQLNGWDVVNENIHLSFFESRLGPQASANAYKTAKFIDPSTTLFLNEYNTIEDSRDTVASPTAYAKKIKDIQSSGGGNLGIGLQGHFNV PDLPYMRSAIDALGALGLPMWLTEVDVQSGENQAMYLEQVLREAHAHPKINGIVLWTAWKPE |
Full Sequence |
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Protein Sequence Length: 553 Download |
FGANALKYDY TASAECLPFP HKPQYNGGII KNAELNRGLR AWSAFGNAKV EHRVSNGNKF 60 VVAHSRNDSH DSISQKIYLN KDKLYTFSAW VQVSKGKILV RAVFKTIRGF KHAGAVIAES 120 NCWSMIKGGL TVDESGPAEL YFESKDTSAE IWVDSVSLQP FTTEEWGTHH QQSIEQKHRR 180 KVRIHVMDKQ DKPLANATIS IVQNKLSFPF GSAINKNILT NTAYQNWFTS RFTVTVFENE 240 MKWDTTEPSQ GQEDYSAADA LLKFAQQHGI PVRGHTVLWE HPGHQPSWVP SLSASQLSKA 300 VTNRINSIMY RYKGQLNGWD VVNENIHLSF FESRLGPQAS ANAYKTAKFI DPSTTLFLNE 360 YNTIEDSRDT VASPTAYAKK IKDIQSSGGG NLGIGLQGHF NVPDLPYMRS AIDALGALGL 420 PMWLTEVDVQ SGENQAMYLE QVLREAHAHP KINGIVLWTA WKPEGCYRMC LTDNNFRNLP 480 TGDVVDKLLK EWGGGGQVLS GTTGPDGALE ASLFHGDYQV TVTQPGANSS YVVRGFALAP 540 TETSQQRLIL RV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 0.0001 | 27 | 148 | 134 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 1.0e-32 | 209 | 429 | 233 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 8.0e-57 | 208 | 458 | 270 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 9.0e-76 | 241 | 485 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN10199.1 | 0 | 4 | 550 | 28 | 581 | endoxylanase [Carica papaya] |
EMBL | CBI22450.1 | 0 | 4 | 550 | 45 | 590 | unnamed protein product [Vitis vinifera] |
EMBL | CBI22450.1 | 0 | 16 | 550 | 591 | 1125 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264556.1 | 0 | 4 | 550 | 108 | 653 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002532418.1 | 0 | 1 | 552 | 16 | 566 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nq6_A | 1e-37 | 210 | 485 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1v0n_A | 2e-35 | 210 | 464 | 16 | 277 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1v0m_A | 2e-35 | 210 | 464 | 16 | 277 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1v0l_A | 2e-35 | 210 | 464 | 16 | 277 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1v0k_A | 2e-35 | 210 | 464 | 16 | 277 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX266128 | 273 | 223 | 492 | 0 |
GR150167 | 262 | 20 | 280 | 0 |
GR454025 | 230 | 8 | 237 | 0 |
DR353177 | 217 | 58 | 274 | 0 |
GR160803 | 262 | 52 | 312 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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