Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I01060.1 |
Family | GH10 |
Protein Properties | Length: 554 Molecular Weight: 62018.1 Isoelectric Point: 8.8796 |
Chromosome | Chromosome/Scaffold: 9 Start: 21587636 End: 21590023 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH10 | 203 | 465 | 0 |
QKKLSFPFGSATNKNILTNSAYQNWFTSRFTVTTFEDEMKWYTTEPSQGREDYSAADALLKFAQQHGISVRGHNVLWDDPRYQPSWVPSLSASQLSKAVA NRIISIIKRYKGQVIGWDVVNENLHFSFFESKLGPQASANAYKTAKFIDPSTTLFLNEYNTIEDSRDRTSSPTAYANKVKSIQSLGGRNLGIGLESHFNV PDLPYMRSAIDTLGALGLPMWLTEVDVQSGPNQKAMYLEQVLREAHAHPKINGIVMWTAWKPE |
Full Sequence |
---|
Protein Sequence Length: 554 Download |
FGANALKYDY TASIECLPFP QKPQYNGGII KNPELNFGLR AWSAFGIAKV EHRVSNGNKF 60 IVAYSRNDSH DSISQKIYLN KDKLYTFSAW VQVSDGKIPV QAIFKTTRGF KHAGAVIAES 120 NCWSMIKGGL TVDESGPAEL YFESKNTSVE IWVDSISLQP FTTEEWRSHH GQSIEEKRKR 180 KVRIHVMDKQ DKPLANATIS IVQKKLSFPF GSATNKNILT NSAYQNWFTS RFTVTTFEDE 240 MKWYTTEPSQ GREDYSAADA LLKFAQQHGI SVRGHNVLWD DPRYQPSWVP SLSASQLSKA 300 VANRIISIIK RYKGQVIGWD VVNENLHFSF FESKLGPQAS ANAYKTAKFI DPSTTLFLNE 360 YNTIEDSRDR TSSPTAYANK VKSIQSLGGR NLGIGLESHF NVPDLPYMRS AIDTLGALGL 420 PMWLTEVDVQ SGPNQKAMYL EQVLREAHAH PKINGIVMWT AWKPEGCYRM CLTDNNFRNL 480 PTGDVVDKLL KEWGGGRKEL SGMTSPDGTL EASLFHGDYQ VTVAQPGANN SYVVQSLEVA 540 PAETSPHRFI LRV* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 0.0003 | 27 | 148 | 135 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 4.0e-36 | 203 | 429 | 239 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 9.0e-57 | 208 | 459 | 270 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 8.0e-84 | 241 | 486 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN10199.1 | 0 | 4 | 551 | 28 | 567 | endoxylanase [Carica papaya] |
EMBL | CAA19866.1 | 0 | 9 | 553 | 119 | 669 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_195110.3 | 0 | 5 | 553 | 22 | 576 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002264556.1 | 0 | 4 | 551 | 108 | 653 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002532418.1 | 0 | 1 | 546 | 16 | 561 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nq6_A | 6e-33 | 210 | 486 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1e0v_A | 1e-32 | 195 | 465 | 1 | 277 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1tux_A | 1e-32 | 210 | 490 | 18 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1v0n_A | 1e-32 | 195 | 465 | 1 | 277 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1v0m_A | 1e-32 | 195 | 465 | 1 | 277 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EX266128 | 277 | 223 | 496 | 0 |
GE471597 | 295 | 142 | 435 | 0 |
GR150167 | 263 | 20 | 281 | 0 |
GR160803 | 262 | 52 | 312 | 0 |
DR353177 | 217 | 58 | 274 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|