Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I01061.1 |
Family | GH10 |
Protein Properties | Length: 523 Molecular Weight: 58760.2 Isoelectric Point: 8.0356 |
Chromosome | Chromosome/Scaffold: 9 Start: 21592611 End: 21594780 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 188 | 450 | 0 |
QKKLSFPFGSATNKNILTNAAYQNWFTSRFTVTTFEDEMKWYTTEPSQGREDYSAADAMLNFARQHGISVRGHNVLWDDPRYQPSWVPSLSASQLSKAVA NRIMSIMKRYKGQVIGWDVVNENLHFSFFESKLGSQASANAYKTAKYMDPSTTLFLNEYNTIEDSRDWATSPTAYAKKVRYIQSLGGGNLGIGLESHFNV PDLPYMRSAIDTLGALGLPMWLTEVDVQSGPNQKAMYLEQVLREAHAHPKINGIVMWTAWKPE |
Full Sequence |
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Protein Sequence Length: 523 Download |
CLPFPHKPQY NGGIIKNPEL NFGLRAWSAF GNAKVEHRVS NGNKFIVAHS RNDSHDSISQ 60 NIYLNKDKLY TFSAWVQVSE GKIPVKAAFK TISGFKHAGA VIAESNCWSM IKGGLTVDES 120 GPAELYFESK NTSVEIWVDS ISLQPFTTEE WRSHHEQSIE EKHKRKVRIH VMDKQDKPVA 180 NATISIVQKK LSFPFGSATN KNILTNAAYQ NWFTSRFTVT TFEDEMKWYT TEPSQGREDY 240 SAADAMLNFA RQHGISVRGH NVLWDDPRYQ PSWVPSLSAS QLSKAVANRI MSIMKRYKGQ 300 VIGWDVVNEN LHFSFFESKL GSQASANAYK TAKYMDPSTT LFLNEYNTIE DSRDWATSPT 360 AYAKKVRYIQ SLGGGNLGIG LESHFNVPDL PYMRSAIDTL GALGLPMWLT EVDVQSGPNQ 420 KAMYLEQVLR EAHAHPKING IVMWTAWKPE GCYRMCLTDN NFRNLPTGDV VDKLLKEWGG 480 GRQELSGMTS PNGTLEASLF HGDYQVTVTQ PGANNSYVVQ SLE |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 4.0e-5 | 12 | 133 | 135 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 2.0e-36 | 188 | 414 | 240 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 6.0e-56 | 193 | 444 | 270 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 9.0e-82 | 226 | 471 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN10199.1 | 0 | 1 | 508 | 40 | 548 | endoxylanase [Carica papaya] |
EMBL | CAA19866.1 | 0 | 1 | 515 | 126 | 643 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_195110.3 | 0 | 1 | 515 | 33 | 550 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002313180.1 | 0 | 1 | 515 | 3 | 517 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532418.1 | 0 | 1 | 517 | 31 | 548 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v0n_A | 2e-34 | 180 | 450 | 1 | 277 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1v0m_A | 2e-34 | 180 | 450 | 1 | 277 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1v0l_A | 2e-34 | 180 | 450 | 1 | 277 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1v0k_A | 2e-34 | 180 | 450 | 1 | 277 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1od8_A | 2e-34 | 180 | 450 | 1 | 277 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX266128 | 277 | 208 | 481 | 0 |
GE471597 | 295 | 127 | 420 | 0 |
GR150167 | 263 | 5 | 266 | 0 |
DR353177 | 217 | 43 | 259 | 0 |
GR160803 | 262 | 37 | 297 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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