Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I01067.1 |
Family | GH3 |
Protein Properties | Length: 669 Molecular Weight: 72992 Isoelectric Point: 6.3248 |
Chromosome | Chromosome/Scaffold: 9 Start: 21618347 End: 21621720 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 1 | 197 | 0 |
MGQVVSTEARAMHNVGQAGLTYWSPNVNVFRDPRWGRGQETPGEDPLVVSRYAANYVRGLQEVVEGGNYTDSRLKVSSCCKHYTAYDVDSWKAVDRFHFD ARVTKQDMEDTYQPPFRSCIEEGRVSSVMCSYNRVNGVPTCADPNLLKGIVRDQWGLDGYIVSDCDSIEVYHDRIHYTPTPEDAVALALKAGLNMNC |
Full Sequence |
---|
Protein Sequence Length: 669 Download |
MGQVVSTEAR AMHNVGQAGL TYWSPNVNVF RDPRWGRGQE TPGEDPLVVS RYAANYVRGL 60 QEVVEGGNYT DSRLKVSSCC KHYTAYDVDS WKAVDRFHFD ARVTKQDMED TYQPPFRSCI 120 EEGRVSSVMC SYNRVNGVPT CADPNLLKGI VRDQWGLDGY IVSDCDSIEV YHDRIHYTPT 180 PEDAVALALK AGLNMNCGDF LSKYTQNAVK QKKVDESVVD QALVYNYAVL MRLGFFDGDP 240 NSLPFGNLGP QDVCTNENQH LALDAAKQGI VLLANEGALP LSESTIKNMA VIGPNANATT 300 VMISNYAGTP CQYTSPLQGL QKFVSTVSYE PGCADVKCSN KSLFEAAVNI ATPADVVVVV 360 VGLSLSIEKE GLDRVNLTLP GLQENLVMEV SEATNGTVIL VIMSAGPVDV SFAKHVSKIK 420 GILWVGYPGQ DGGDAIAQVI FGNYNPAILL GGRSPFTWYP QEYADQVPMT DMNMRANAST 480 NYPGRTYRFY TGKSVYQFGH GLSYSYYSKF IISAPSTILV QLAPTPDQHD ILCSSSKVQI 540 LSDSNAQAID ISAIKCTDLG FNIVVGVTND GKMDGTHVVL VFWKPPRSRG LITGVPIQQL 600 VGFERAEVKV GKTEKVTVRV DVCKHLSLAD KEGNRLLVTG RHTLVVGSPS ECQARHRLNI 660 RVEAMKMN* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 2.0e-48 | 1 | 320 | 328 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-52 | 270 | 506 | 243 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 2.0e-55 | 1 | 222 | 227 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-62 | 23 | 605 | 636 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 647 | 653 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02547.1 | 0 | 1 | 662 | 130 | 773 | beta-1,4-xylosidase [Arabidopsis thaliana] |
EMBL | CAN82161.1 | 0 | 1 | 662 | 130 | 786 | hypothetical protein [Vitis vinifera] |
EMBL | CBI22460.1 | 0 | 1 | 662 | 154 | 762 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264114.1 | 0 | 1 | 662 | 154 | 810 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002527511.1 | 0 | 1 | 662 | 128 | 784 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 23 | 620 | 128 | 696 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 3u48_A | 0 | 23 | 620 | 128 | 696 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 3u4a_B | 0 | 23 | 620 | 128 | 696 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 3u4a_A | 0 | 23 | 620 | 128 | 696 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2x41_A | 2e-29 | 24 | 508 | 117 | 604 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
ES793662 | 327 | 157 | 483 | 0 |
EX330260 | 305 | 37 | 336 | 0 |
CO125420 | 269 | 215 | 483 | 0 |
ES823914 | 247 | 109 | 355 | 0 |
ES809530 | 312 | 280 | 590 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|