Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I01953.1 |
Family | GH19 |
Protein Properties | Length: 176 Molecular Weight: 19844.2 Isoelectric Point: 10.4346 |
Chromosome | Chromosome/Scaffold: 9 Start: 29442652 End: 29443572 |
Description | Chitinase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH19 | 67 | 169 | 1.2e-30 |
NYKHGPTGKALGFDGLRNQEKVSNDSLVAFKTALWLWMTERKPKPSCPVVMVGKTAGLGLVANIIYGGLECGLLGDARVNDRLSYFRRYVELLGVDTEPN LDC |
Full Sequence |
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Protein Sequence Length: 176 Download |
MSIPAILFFV FFCVFDTHKT KRIKRKDIIS FGIFRKSEIK QFIRQNSSLA LARAVLHLRN 60 DLRCGRNYKH GPTGKALGFD GLRNQEKVSN DSLVAFKTAL WLWMTERKPK PSCPVVMVGK 120 TAGLGLVANI IYGGLECGLL GDARVNDRLS YFRRYVELLG VDTEPNLDCQ NQKSF* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00182 | Glyco_hydro_19 | 7.0e-39 | 67 | 169 | 115 | + Chitinase class I. | ||
cd00325 | chitinase_glyco_hydro_19 | 2.0e-42 | 67 | 169 | 115 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. |
Gene Ontology | |
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GO Term | Description |
GO:0004568 | chitinase activity |
GO:0006032 | chitin catabolic process |
GO:0016998 | cell wall macromolecule catabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF00131.1 | 0 | 59 | 175 | 149 | 277 | AF147091_1 class II chitinase [Fragaria x ananassa] |
GenBank | ABQ42593.1 | 0 | 59 | 175 | 149 | 277 | chitinase [Fragaria x ananassa] |
GenBank | ABU55294.1 | 0 | 59 | 175 | 149 | 277 | class II chitinase [Fragaria x ananassa] |
GenBank | ACU24402.1 | 0 | 59 | 175 | 144 | 272 | unknown [Glycine max] |
RefSeq | XP_002515175.1 | 0 | 59 | 175 | 146 | 274 | class I chitinase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dyg_B | 6e-34 | 59 | 175 | 115 | 243 | A Chain A, Polygalacturonase From Aspergillus Aculeatus |
PDB | 4dyg_A | 6e-34 | 59 | 175 | 115 | 243 | A Chain A, Polygalacturonase From Aspergillus Aculeatus |
PDB | 4dwx_B | 6e-34 | 59 | 175 | 115 | 243 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 4dwx_A | 6e-34 | 59 | 175 | 115 | 243 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 1cns_B | 8e-32 | 59 | 175 | 114 | 242 | A Chain A, Crystal Structure Of Chitinase At 1.91a Resolution |