Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I02267.1 |
Family | GH19 |
Protein Properties | Length: 147 Molecular Weight: 15884.8 Isoelectric Point: 8.9491 |
Chromosome | Chromosome/Scaffold: 9 Start: 33181142 End: 33182529 |
Description | basic chitinase |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH19 | 27 | 145 | 2.8026e-45 |
VSSVISRAQFDQLLKHRNDQACPAKGFYTYDAFVAAARSFPGFGTTGTRDTRYQEVAAFLAQTSHETTGGKKGAPDGPYAWGYCFVEERDRSKDYCDPKS GWPCAPGRKYYGRGPIQIT |
Full Sequence |
---|
Protein Sequence Length: 147 Download |
MRSLWAIALL ASCLAVLGAS AQQGGNVSSV ISRAQFDQLL KHRNDQACPA KGFYTYDAFV 60 AAARSFPGFG TTGTRDTRYQ EVAAFLAQTS HETTGGKKGA PDGPYAWGYC FVEERDRSKD 120 YCDPKSGWPC APGRKYYGRG PIQITQ* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01677 | pln_FAD_oxido | 0.005 | 58 | 136 | 82 | + plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown. | ||
cd00442 | lysozyme_like | 0.002 | 83 | 145 | 63 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
cd00325 | chitinase_glyco_hydro_19 | 1.0e-60 | 31 | 145 | 115 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
pfam00182 | Glyco_hydro_19 | 3.0e-66 | 30 | 145 | 116 | + Chitinase class I. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004568 | chitinase activity |
GO:0006032 | chitin catabolic process |
GO:0016998 | cell wall macromolecule catabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3CQL | 0 | 27 | 145 | 2 | 120 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
GenBank | AAD54934.1 | 0 | 1 | 145 | 6 | 144 | AF141372_1 chitinase precursor [Petroselinum crispum] |
DDBJ | BAH28788.1 | 0 | 1 | 145 | 1 | 140 | class II chitinase [Vaccinium corymbosum] |
Swiss-Prot | Q9FRV0 | 0 | 25 | 146 | 23 | 144 | CHIC_SECCE RecName: Full=Basic endochitinase C; AltName: Full=Rye seed chitinase-c; Short=RSC-c; Flags: Precursor |
Swiss-Prot | Q9FRV1 | 0 | 24 | 146 | 77 | 199 | CHIA_SECCE RecName: Full=Basic endochitinase A; AltName: Full=Rye seed chitinase-a; Short=RSC-a; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3cql_B | 0 | 27 | 145 | 2 | 120 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
PDB | 3cql_A | 0 | 27 | 145 | 2 | 120 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
PDB | 4dyg_B | 0 | 26 | 146 | 2 | 122 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
PDB | 4dyg_A | 0 | 26 | 146 | 2 | 122 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
PDB | 4dwx_B | 0 | 26 | 146 | 2 | 122 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |