Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I02271.1 |
Family | GH19 |
Protein Properties | Length: 269 Molecular Weight: 29656.3 Isoelectric Point: 9.0884 |
Chromosome | Chromosome/Scaffold: 9 Start: 33312271 End: 33313939 |
Description | basic chitinase |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH19 | 27 | 261 | 0 |
VSSVISRAQFDQLLKHRNDQACPAKGFYTYDAFVAAAKSFPGFGTTSTRDTRYQEVAAFLAQTSHETTGGKKGAPDGPYAWGYCFVEERDRSRDYCDPKS GWPCAPGRKYYGRGPIQITHNYNYGQAGRSLHSDLIKNPDAVAKDPVLSFRTALWFWMTPQPPKPSSHDVITGRWRPSPADQAAGRVPGYGLITNIINGR EECGKGPNQFVEDRIGFYKRYSDILKVGYGNNLDC |
Full Sequence |
---|
Protein Sequence Length: 269 Download |
MRSLWAIALL ASCLAVLSAS AQQGGDVSSV ISRAQFDQLL KHRNDQACPA KGFYTYDAFV 60 AAAKSFPGFG TTSTRDTRYQ EVAAFLAQTS HETTGGKKGA PDGPYAWGYC FVEERDRSRD 120 YCDPKSGWPC APGRKYYGRG PIQITHNYNY GQAGRSLHSD LIKNPDAVAK DPVLSFRTAL 180 WFWMTPQPPK PSSHDVITGR WRPSPADQAA GRVPGYGLIT NIINGREECG KGPNQFVEDR 240 IGFYKRYSDI LKVGYGNNLD CYNQKPYA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3179 | COG3179 | 2.0e-10 | 57 | 185 | 149 | + Predicted chitinase [General function prediction only] | ||
cd00442 | lysozyme_like | 5.0e-16 | 83 | 223 | 141 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
cd00325 | chitinase_glyco_hydro_19 | 4.0e-136 | 31 | 261 | 231 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
pfam00182 | Glyco_hydro_19 | 2.0e-142 | 30 | 261 | 232 | + Chitinase class I. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004568 | chitinase activity |
GO:0006032 | chitin catabolic process |
GO:0016998 | cell wall macromolecule catabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH28788.1 | 0 | 1 | 267 | 1 | 262 | class II chitinase [Vaccinium corymbosum] |
EMBL | CAA92277.1 | 0 | 9 | 268 | 4 | 263 | chitinase [Gossypium hirsutum] |
Swiss-Prot | Q9FRV1 | 0 | 24 | 268 | 77 | 321 | CHIA_SECCE RecName: Full=Basic endochitinase A; AltName: Full=Rye seed chitinase-a; Short=RSC-a; Flags: Precursor |
RefSeq | XP_002269727.1 | 0 | 26 | 268 | 82 | 325 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002269824.1 | 0 | 24 | 268 | 64 | 309 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dyg_B | 0 | 27 | 268 | 3 | 244 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 4dyg_A | 0 | 27 | 268 | 3 | 244 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 4dwx_B | 0 | 27 | 268 | 3 | 244 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 4dwx_A | 0 | 27 | 268 | 3 | 244 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 3cql_B | 0 | 27 | 268 | 2 | 243 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |