Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I02389.1 |
Family | AA4 |
Protein Properties | Length: 514 Molecular Weight: 55841.1 Isoelectric Point: 6.2002 |
Chromosome | Chromosome/Scaffold: 9 Start: 34523063 End: 34532783 |
Description | FAD-linked oxidases family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA4 | 53 | 258 | 1.9e-24 |
ISYFRDLLGEKNVIQDEDALLAANMDWMRKYKGSSKLLLLPRSTEEVSQVLKYCNSRCLAVVPQGGNTGLVGGSVPVFDEVIVNLGSMNKVISFDEVSGI LVSEAGCILESLVNFLDNNGFIMPLDLGSKGSCQIGGNVSTNAGGLRLIRYGSLHANVLGLEAVLANGDVLDMLGTLRKDNTGYDLKHLFIGSEGSLGIV TKVSIL |
Full Sequence |
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Protein Sequence Length: 514 Download |
MKMDGWRASA RRILKLSSRP APAPRFAPGR GNPARHGTIQ RNPEFATINS DDISYFRDLL 60 GEKNVIQDED ALLAANMDWM RKYKGSSKLL LLPRSTEEVS QVLKYCNSRC LAVVPQGGNT 120 GLVGGSVPVF DEVIVNLGSM NKVISFDEVS GILVSEAGCI LESLVNFLDN NGFIMPLDLG 180 SKGSCQIGGN VSTNAGGLRL IRYGSLHANV LGLEAVLANG DVLDMLGTLR KDNTGYDLKH 240 LFIGSEGSLG IVTKVSILTP PKLSSVNVAF LACTDYLSCQ KLLLEARRKL GEVLSAFEFL 300 DEQAMDLALN HLEGVRNPLP PALHKFYVLI ETTGSDERSD REKLEAFLAH SMEEGLISDG 360 VVAQDIQQAS SVWNIREGIA EALMKAGAVY KYDLSIPVEK IYDIVEELRN KLGHLARVVG 420 FGHLGDGNLH LNISCPQYDD AVLAQIEPFV YEWTSKHGGS ISAEHGLGLM KADKIFYSKS 480 PAAVQLMASV KNLLDPNHIL NPYKVLPHSL SSP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK11230 | PRK11230 | 1.0e-37 | 57 | 507 | 466 | + glycolate oxidase subunit GlcD; Provisional | ||
PLN02805 | PLN02805 | 6.0e-41 | 89 | 507 | 429 | + D-lactate dehydrogenase [cytochrome] | ||
pfam02913 | FAD-oxidase_C | 2.0e-62 | 262 | 505 | 252 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
TIGR00387 | glcD | 5.0e-74 | 91 | 504 | 429 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
COG0277 | GlcD | 9.0e-111 | 55 | 508 | 465 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0016491 | oxidoreductase activity |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI17437.1 | 0 | 80 | 512 | 1 | 433 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_568003.2 | 0 | 39 | 512 | 86 | 558 | FAD linked oxidase family protein [Arabidopsis thaliana] |
RefSeq | XP_002268002.1 | 0 | 39 | 512 | 77 | 550 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310828.1 | 0 | 39 | 512 | 58 | 528 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521506.1 | 0 | 39 | 512 | 92 | 564 | d-lactate dehydrognease 2, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3pm9_F | 0 | 47 | 506 | 12 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
PDB | 3pm9_E | 0 | 47 | 506 | 12 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
PDB | 3pm9_D | 0 | 47 | 506 | 12 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
PDB | 3pm9_C | 0 | 47 | 506 | 12 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
PDB | 3pm9_B | 0 | 47 | 506 | 12 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HS065296 | 270 | 190 | 459 | 0 |
GO838775 | 330 | 93 | 422 | 0 |
GO839525 | 331 | 82 | 412 | 0 |
CO071363 | 284 | 75 | 358 | 0 |
HS065296 | 29 | 459 | 487 | 0.0001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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