y
Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I02466.1 |
Family | AA6 |
Protein Properties | Length: 208 Molecular Weight: 22391.5 Isoelectric Point: 5.9637 |
Chromosome | Chromosome/Scaffold: 9 Start: 35389905 End: 35393245 |
Description | Quinone reductase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA6 | 57 | 139 | 1.9e-27 |
RVFIVFYSMYGHVEALAKRMKKGVDGVDGVEGVLYRVPETLSPEALEKMKAPPKDEAVPVIGAGELVEADAVLFGFPTRYGCM |
Full Sequence |
---|
Protein Sequence Length: 208 Download |
MGKGGGCVPS KKKLSGVAAD GERDSVPIPV EVEVEVEVED QVQEAEPKAA PGVAKLRVFI 60 VFYSMYGHVE ALAKRMKKGV DGVDGVEGVL YRVPETLSPE ALEKMKAPPK DEAVPVIGAG 120 ELVEADAVLF GFPTRYGCMG RADEGLLRRH WPAVEGAEAR RQAGRVLRGH GHSGRRAGDD 180 CLDCNHPVGS PWDAVCSDWV HFWCRYV* 240 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00258 | Flavodoxin_1 | 0.006 | 60 | 135 | 84 | + Flavodoxin. | ||
COG0655 | WrbA | 0.005 | 56 | 137 | 88 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 1.0e-16 | 57 | 139 | 83 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 4.0e-19 | 57 | 139 | 83 | + NAD(P)H:quinone oxidoreductase; Provisional |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002273030.1 | 0 | 1 | 139 | 1 | 139 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310794.1 | 4.2039e-45 | 1 | 139 | 1 | 137 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327699.1 | 0 | 1 | 139 | 1 | 136 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519089.1 | 1.96182e-44 | 1 | 139 | 1 | 139 | Minor allergen Alt a, putative [Ricinus communis] |
RefSeq | XP_002525103.1 | 2.8026e-45 | 1 | 139 | 1 | 140 | Minor allergen Alt a, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3b6m_B | 9e-18 | 57 | 139 | 3 | 83 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3b6m_A | 9e-18 | 57 | 139 | 3 | 83 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3b6k_B | 9e-18 | 57 | 139 | 3 | 83 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3b6k_A | 9e-18 | 57 | 139 | 3 | 83 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3b6j_B | 9e-18 | 57 | 139 | 3 | 83 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HS253613 | 87 | 53 | 139 | 0 |
HS253613 | 69 | 140 | 208 | 0 |
HS008391 | 87 | 53 | 139 | 0 |
HS008391 | 69 | 140 | 208 | 0 |
ES435636 | 143 | 1 | 139 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|