Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.J00603.1 |
Family | GH3 |
Protein Properties | Length: 596 Molecular Weight: 64552.7 Isoelectric Point: 5.314 |
Chromosome | Chromosome/Scaffold: 10 Start: 6740558 End: 6743572 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 64 | 307 | 0 |
SSRLGIPMIYGIDALHGQNNVYQATIFPHNVGLGATRDPDLVKRIGAATALEVRATGINYAFAPCIAVCRDPRWGRCYESYSEDPSVVQAMTSIILGLQG EIPAGGRKGEPYLGGKCYYLSTLDRDKILACAKHYVGDGGTTRGINENNTVIDWHGLLSIHMPGYYKAIIEGISTIMVSYSSWNGVKMHANRFLITDFLK NTLKFKGFVISDWAGIDKITTPPGANYTYSVQMGIGAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 596 Download |
MRRMTLQEKV GQMTQIDRSA VTPEILRDYS IGSVLSGGGS VPFPQAKGQD WMDMVNSYQN 60 GSLSSRLGIP MIYGIDALHG QNNVYQATIF PHNVGLGATR DPDLVKRIGA ATALEVRATG 120 INYAFAPCIA VCRDPRWGRC YESYSEDPSV VQAMTSIILG LQGEIPAGGR KGEPYLGGKC 180 YYLSTLDRDK ILACAKHYVG DGGTTRGINE NNTVIDWHGL LSIHMPGYYK AIIEGISTIM 240 VSYSSWNGVK MHANRFLITD FLKNTLKFKG FVISDWAGID KITTPPGANY TYSVQMGIGA 300 GIDMVMVALN HTLFIDTLTK LVNDNVIPMS RIDDAVERIM RVKFMMGLFE NPMGDQTYLS 360 QLGSQEHRDL AREAVRKSLV LLKNGQNADP PVLPLAKNAS KILVAGTHAN NLGYQCGGWT 420 ITWQGGSGNN LTSGTTILGG IGKAVDLDTE VVFSENPDAD FIQSHNFSYA IVVVGELPYA 480 ETAGDSTNLT LAEPGEDIIY NVCSSVKCVV VVVSGRPVMI EPLVAQMDAL VAAWLPGSQG 540 EGVADVLFGD YGFTGKLPRT WFKTVDQLPM NVGDPHYDPL FPFGFGLTTE PTGEQ* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 3.0e-32 | 66 | 571 | 552 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-39 | 379 | 588 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-76 | 1 | 588 | 658 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 9.0e-83 | 4 | 422 | 426 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-85 | 5 | 342 | 342 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 1 | 592 | 41 | 623 | unknown [Populus trichocarpa] |
EMBL | CAN63654.1 | 0 | 1 | 591 | 23 | 604 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266675.1 | 0 | 1 | 591 | 43 | 624 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002271545.1 | 0 | 1 | 595 | 42 | 627 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 1 | 592 | 18 | 600 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 3 | 592 | 22 | 602 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1x38_A | 0 | 3 | 592 | 22 | 602 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1lq2_A | 0 | 3 | 592 | 22 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 3 | 592 | 22 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 3 | 592 | 22 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 427 | 42 | 468 | 0 |
FN998758 | 324 | 42 | 365 | 0 |
FN998735 | 312 | 42 | 353 | 0 |
FN998511 | 312 | 42 | 353 | 0 |
HO784016 | 29 | 1 | 29 | 0.03 |
Sequence Alignments (This image is cropped. Click for full image.) |
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