y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.J00836.1 |
Family | GT48 |
Protein Properties | Length: 1959 Molecular Weight: 225726 Isoelectric Point: 9.2614 |
Chromosome | Chromosome/Scaffold: 10 Start: 8972203 End: 8995441 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1062 | 1812 | 0 |
VPSNLEARRRISFFSNSLFMEMPAAPKVRNMLSFSVLTPYYTEDVLFSLKDLESQNEDGVSILFYLQKIFPDEWTNFLERMGCTNEDELKETDELEENLR LWASYRGQTLTKTVRGMMYYRKALELQAFLDMAKDEDLMEGYKAVELNTERGDRSLWAQCQAVADMKFAYVVSCQQYGIDKRSGHQSAHDILRLMTTYPS VRVAFIDEVEEPSKDGGRINSKAYYSTLVKAALPKSIDPSEPVQNLDQVIYRIKLPGNAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMRN LLQEFLKKDDGVRNPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLR EGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTIGFYFSTLITVLTVYVFLYGRLYLVLSGLEKELSAQPG IRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERGFRTALSDFVLMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRATGRGFVVFHAKFADNYRMYS RSHFVKGFELMVLLLVYEIFGQSYRGAVAYILITISMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWIGNRGGIGVPPEKSWESWWEEEQEHLRHS GKRGIIAEILLALRFFIYQYGLVYHLSITHTRSVLVYGISWLVIFLILFVM |
Full Sequence |
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Protein Sequence Length: 1959 Download |
MCFKGFGGGK CPPPRGGADQ PTQPPRGGSF GLRPLAPSEE SSFDSEVVPS SLVEIAPILR 60 VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE NDPTLKGRVK 120 KSDAREMQSF YQHYYKKYIQ ALQNAADKAD RAQLTKAYQT ANVLFEVLKA VNMTQSMEVD 180 KEILEAQFKV EEKTQIYVPY NILPLDPDSA NQAIMKYPEI IAAVVALRNT RGLPWPKDYK 240 KKDYDILDWL QAMFGFQKDN VANQREHLIL LLANVHIRRF PNPNQPPKLD DQALTEVMKK 300 LFKNYKKWCK FLDRKSSLWL PTIQQEVQQR KLLYMGLYLL IWGEAANLRF MPECLCYIYH 360 HMAFELYGML AGNVSPMTGE NVKPAYGGED EAFLTKVVTP IYQVIAKEAE RSKRGRSKHS 420 QWRNYDDLNE YFWSAECFRL GWPMRTNAGF FHLPAERQPF EKSEDSKPPH RDQWVGKVNF 480 VEIRSFWHIF RSFDRMWSFF ILCLQAMIIV AWNGSGDPTA VFTPDVFKKV LSIFITAAIL 540 KLGQAVLDVI LSWKAQQSMS YFVKLRYILK VVSAASWVII LPVTYAYTWE NPPGFAQTIK 600 SWFGNGSKSP SLFILAVVVY LSPNMLAALL FLFPSVRRYL ESSHYKIVTL MMWWSQPRLY 660 VGRGMHESTF SLFKYTLFWV LLIITKLAFS YYIEIKPLVG PTKAIMSAHV TNFQWHEFFP 720 QAKNNIGVVI AVWAPVILVY FMDTQIWYAI FSTLFGGIYG AFRRLGEIRT LGMLRSRFET 780 LPHVFNACLI PDEKTERKKR GFFSRNYDAK DPNNKEKVEA RFAQLWNTII DSFREEDLIS 840 NREKNLLLVP YWADRELEDI IQWPPFLLAS KIPIALDMAK DSNGNDRELR KRIDSDTYMS 900 CAIRECYAQF RNIIMVLVQG QREKRVIEDI FSQVDKHIRE NTLIRDRELR MSALPSLYNK 960 FVELIKCLLL NNPEDRDKVV ILFQDMLEVV TRDMMEEYTS PIDSIHGGSG NDGITPLDSQ 1020 QHQLFASEGA IKFPIERQTE AWKEKIKRLD LLLTTKESAM DVPSNLEARR RISFFSNSLF 1080 MEMPAAPKVR NMLSFSVLTP YYTEDVLFSL KDLESQNEDG VSILFYLQKI FPDEWTNFLE 1140 RMGCTNEDEL KETDELEENL RLWASYRGQT LTKTVRGMMY YRKALELQAF LDMAKDEDLM 1200 EGYKAVELNT ERGDRSLWAQ CQAVADMKFA YVVSCQQYGI DKRSGHQSAH DILRLMTTYP 1260 SVRVAFIDEV EEPSKDGGRI NSKAYYSTLV KAALPKSIDP SEPVQNLDQV IYRIKLPGNA 1320 ILGEGKPENQ NHAIIFTRGE GLQTIDMNQD NYMEEALKMR NLLQEFLKKD DGVRNPTILG 1380 LREHIFTGSV SSLAWFMSNQ ETSFVTIGQR LLANPLKVRF HYGHPDVFDR LFHLTRGGVS 1440 KASKVINLSE DIFAGFNSTL REGNVTHHEY IQVGKGRDVG LNQISMFEAK IANGNGEQTL 1500 SRDIYRLGHR FDFFRMLSCY FTTIGFYFST LITVLTVYVF LYGRLYLVLS GLEKELSAQP 1560 GIRDNKPLQV ALASQSFVQI GFLMALPMLM EIGLERGFRT ALSDFVLMQL QLAPVFFTFS 1620 LGTKTHYYGR TLLHGGAKYR ATGRGFVVFH AKFADNYRMY SRSHFVKGFE LMVLLLVYEI 1680 FGQSYRGAVA YILITISMWF MVGTWLFAPF LFNPSGFEWQ KIVDDWTDWN KWIGNRGGIG 1740 VPPEKSWESW WEEEQEHLRH SGKRGIIAEI LLALRFFIYQ YGLVYHLSIT HTRSVLVYGI 1800 SWLVIFLILF VMKTISVGRR KFSADFQLVF RLIKGLIFLT FVSILVTLIA LPHMTIRDII 1860 VCVLAFMPTG WGMLLIAQAC KPLVVKAGIW GSVRTLARGF EIIMGLLLFT PVAFLAWFPF 1920 VSEFQTRMLF NQAFSRGLQI SRILGGQRKD KDRSANSK* 1980 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 2.0e-10 | 55 | 185 | 136 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 2.0e-59 | 329 | 445 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1062 | 1809 | 824 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI16456.1 | 0 | 40 | 1958 | 30 | 1947 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283298.1 | 0 | 40 | 1958 | 30 | 1946 | PREDICTED: similar to Callose synthase 3 [Vitis vinifera] |
RefSeq | XP_002299147.1 | 0 | 7 | 1958 | 7 | 1939 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304888.1 | 0 | 5 | 1958 | 9 | 1960 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528124.1 | 0 | 15 | 1958 | 6 | 1954 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2lxm_A | 0.003 | 59 | 168 | 21 | 128 | B Chain B, Lip5-chmp5 |
PDB | 2lxl_A | 0.004 | 59 | 168 | 21 | 128 | A Chain A, Lip5(mit)2 |